RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 RNASE11Q8TAA1 199 aaKnown RBP13.8□□□□□ -0.2
TRIM47-205ENST00000587774 C15orf40Q8WUR7 153 aa13.8□□□□□ -0.2
TRIM47-205ENST00000587774 RRNAD1Q96FB5 475 aaKnown RBP13.8□□□□□ -0.2
TRIM47-205ENST00000587774 CSTL1Q9H114 145 aa13.8□□□□□ -0.2
TRIM47-205ENST00000587774 MS4A6AQ9H2W1 248 aa13.8□□□□□ -0.2
TRIM47-205ENST00000587774 FNDC4Q9H6D8 234 aaPredicted RBP13.8□□□□□ -0.2
TRIM47-205ENST00000587774 VPS13DQ5THJ4 4388 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 MPTX1A8MV57 137 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 RGS5O15539 181 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 DFFBO76075 338 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 OPRK1P41145 380 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 SUB1P53999 127 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIM47-205ENST00000587774 PAFAH1B2P68402 229 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 BSXQ3C1V8 233 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 Q6ZRM9 215 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 TMEM217Q8N7C4 229 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 LHFPL5Q8TAF8 219 aa13.79□□□□□ -0.2
TRIM47-205ENST00000587774 CD5P06127 495 aa13.78□□□□□ -0.2
TRIM47-205ENST00000587774 OR5AC1P0C628 307 aa13.78□□□□□ -0.2
TRIM47-205ENST00000587774 FAM24BQ8N5W8 94 aa13.78□□□□□ -0.2
TRIM47-205ENST00000587774 TMEM222Q9H0R3 208 aa13.78□□□□□ -0.2
TRIM47-205ENST00000587774 ENY2Q9NPA8 101 aa13.78□□□□□ -0.2
TRIM47-205ENST00000587774 CLN5O75503 358 aa13.77□□□□□ -0.21
TRIM47-205ENST00000587774 B3GALNT1O75752 331 aa13.77□□□□□ -0.21
TRIM47-205ENST00000587774 RPL11P62913 178 aaKnown RBP13.77□□□□□ -0.21
TRIM47-205ENST00000587774 SSBP1Q04837 148 aaKnown RBP13.77□□□□□ -0.21
TRIM47-205ENST00000587774 SPCS2Q15005 226 aa13.77□□□□□ -0.21
TRIM47-205ENST00000587774 LEMD1Q68G75 181 aa13.77□□□□□ -0.21
TRIM47-205ENST00000587774 GATAD1Q8WUU5 269 aa13.77□□□□□ -0.21
TRIM47-205ENST00000587774 RTBDNQ9BSG5 229 aaPredicted RBP13.77□□□□□ -0.21
TRIM47-205ENST00000587774 C14orf166Q9Y224 244 aaKnown RBP13.77□□□□□ -0.21
TRIM47-205ENST00000587774 DNAH10Q8IVF4 4471 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 TRAV2A0A0B4J234 112 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 DNASE2O00115 360 aaPredicted RBP13.76□□□□□ -0.21
TRIM47-205ENST00000587774 CTDSP2O14595 271 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 CDS2O95674 445 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 CA1P00915 261 aaPredicted RBP13.76□□□□□ -0.21
TRIM47-205ENST00000587774 DEFB131AP59861 70 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 MRPS10P82664 201 aaKnown RBP13.76□□□□□ -0.21
TRIM47-205ENST00000587774 MEF2DQ14814 521 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 MLANAQ16655 118 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 AARDQ4LEZ3 155 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 OR4X1Q8NH49 305 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 GLYATL2Q8WU03 294 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 SMIM4Q8WVI0 70 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 RBPMSQ93062 196 aaKnown RBP13.76□□□□□ -0.21
TRIM47-205ENST00000587774 RARRES2Q99969 163 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 MRPS26Q9BYN8 205 aaKnown RBP13.76□□□□□ -0.21
TRIM47-205ENST00000587774 TMEM231Q9H6L2 316 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 NAA60Q9H7X0 242 aa13.76□□□□□ -0.21
TRIM47-205ENST00000587774 KLK5Q9Y337 293 aaPredicted RBP13.76□□□□□ -0.21
TRIM47-205ENST00000587774 NPPCP23582 126 aa13.75□□□□□ -0.21
TRIM47-205ENST00000587774 RPL5P46777 297 aaKnown RBP13.75□□□□□ -0.21
TRIM47-205ENST00000587774 ALDH3B2P48448 385 aa13.75□□□□□ -0.21
TRIM47-205ENST00000587774 SPCS3P61009 180 aa13.75□□□□□ -0.21
TRIM47-205ENST00000587774 GPR141Q7Z602 305 aa13.75□□□□□ -0.21
TRIM47-205ENST00000587774 FAM219AQ8IW50 185 aa13.75□□□□□ -0.21
TRIM47-205ENST00000587774 OR4C16Q8NGL9 310 aa13.75□□□□□ -0.21
TRIM47-205ENST00000587774 OR11H2Q8NH07 326 aa13.75□□□□□ -0.21
TRIM47-205ENST00000587774 PHLDA1Q8WV24 401 aaPredicted RBP13.75□□□□□ -0.21
TRIM47-205ENST00000587774 RABAC1Q9UI14 185 aa13.75□□□□□ -0.21
TRIM47-205ENST00000587774 DNAH6Q9C0G6 4158 aa13.75□□□□□ -0.21
TRIM47-205ENST00000587774 TEX13DA0A0J9YY54 714 aaPredicted RBP13.74□□□□□ -0.21
TRIM47-205ENST00000587774 IGKV1-17P01599 117 aa13.74□□□□□ -0.21
TRIM47-205ENST00000587774 HTR2BP41595 481 aa13.74□□□□□ -0.21
TRIM47-205ENST00000587774 TIGITQ495A1 244 aa13.74□□□□□ -0.21
TRIM47-205ENST00000587774 SELENOHQ8IZQ5 122 aaKnown RBP13.74□□□□□ -0.21
TRIM47-205ENST00000587774 OR52E5Q8NH55 327 aa13.74□□□□□ -0.21
TRIM47-205ENST00000587774 METTL26Q96S19 204 aa13.74□□□□□ -0.21
TRIM47-205ENST00000587774 C11orf68Q9H3H3 251 aaKnown RBP13.74□□□□□ -0.21
TRIM47-205ENST00000587774 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.74□□□□□ -0.21
TRIM47-205ENST00000587774 CACNG5Q9UF02 275 aa13.74□□□□□ -0.21
TRIM47-205ENST00000587774 A0A1W2PS18 150 aa13.73□□□□□ -0.21
TRIM47-205ENST00000587774 CRYM-AS1A6NIL9 109 aa13.73□□□□□ -0.21
TRIM47-205ENST00000587774 DISC1C4P0D8 188 aa13.73□□□□□ -0.21
TRIM47-205ENST00000587774 SCGB2A1O75556 95 aa13.73□□□□□ -0.21
TRIM47-205ENST00000587774 AKAIN1P0CW23 69 aa13.73□□□□□ -0.21
TRIM47-205ENST00000587774 CRYBB3P26998 211 aa13.73□□□□□ -0.21
TRIM47-205ENST00000587774 P2RY1P47900 373 aa13.73□□□□□ -0.21
TRIM47-205ENST00000587774 SURF2Q15527 256 aaPredicted RBP13.73□□□□□ -0.21
TRIM47-205ENST00000587774 STXBP6Q8NFX7 210 aa13.73□□□□□ -0.21
TRIM47-205ENST00000587774 TMEM230Q96A57 120 aa13.73□□□□□ -0.21
TRIM47-205ENST00000587774 HEYLQ9NQ87 328 aaPredicted RBP13.73□□□□□ -0.21
TRIM47-205ENST00000587774 K7EQG2 157 aa13.72□□□□□ -0.21
TRIM47-205ENST00000587774 NANOS2P60321 138 aaKnown RBP13.72□□□□□ -0.21
TRIM47-205ENST00000587774 IL18Q14116 193 aa13.72□□□□□ -0.21
TRIM47-205ENST00000587774 TMEM268Q5VZI3 342 aa13.72□□□□□ -0.21
TRIM47-205ENST00000587774 STHQ8IWL8 128 aa13.72□□□□□ -0.21
TRIM47-205ENST00000587774 SLC24A4Q8NFF2 622 aa13.72□□□□□ -0.21
TRIM47-205ENST00000587774 GPR146Q96CH1 333 aa13.72□□□□□ -0.21
TRIM47-205ENST00000587774 GPR132Q9UNW8 380 aa13.72□□□□□ -0.21
TRIM47-205ENST00000587774 RPS10-NUDT3A0A1W2PQS6 291 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 CTDSPLO15194 276 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 NXPH3O95157 252 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 IGLC1P0CG04 106 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 RND2P52198 227 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 DHODHQ02127 395 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 TMEM187Q14656 261 aa13.71□□□□□ -0.21
TRIM47-205ENST00000587774 RBMS2Q15434 407 aaKnown RBP13.71□□□□□ -0.21
TRIM47-205ENST00000587774 C2orf83Q53S99 150 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms