RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 PAXXQ9BUH6 204 aa13.39□□□□□ -0.27
RANBP3-209ENST00000587411 IGHV3OR15-7A0A075B7D8 119 aa13.39□□□□□ -0.27
RANBP3-209ENST00000587411 TRAV5A0A0B4J249 113 aa13.39□□□□□ -0.27
RANBP3-209ENST00000587411 RNFT1Q5M7Z0 435 aa13.39□□□□□ -0.27
RANBP3-209ENST00000587411 UTF1Q5T230 341 aa13.39□□□□□ -0.27
RANBP3-209ENST00000587411 LOXL4Q96JB6 756 aa13.39□□□□□ -0.27
RANBP3-209ENST00000587411 SOX21Q9Y651 276 aaPredicted RBP13.39□□□□□ -0.27
RANBP3-209ENST00000587411 DLL1O00548 723 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 COX7A2P2O60397 106 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 PPBPP02775 128 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 CAMPP49913 170 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 MORN5Q5VZ52 161 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 SSBP4Q9BWG4 385 aaPredicted RBP13.38□□□□□ -0.27
RANBP3-209ENST00000587411 C7orf69Q9H7B7 122 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 COL27A1Q8IZC6 1860 aaPredicted RBP13.38□□□□□ -0.27
RANBP3-209ENST00000587411 TMEM265A0A087WTH1 108 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 IGLV1-44P01699 117 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 HBBP68871 147 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 GUSBP1Q15486 140 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 FAM120AOSQ5T036 256 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 SPATA12Q7Z6I5 190 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 FER1L6-AS2Q96M78 137 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 CLEC5AQ9NY25 188 aa13.38□□□□□ -0.27
RANBP3-209ENST00000587411 CA7P43166 264 aa13.37□□□□□ -0.27
RANBP3-209ENST00000587411 BPIFB3P59826 476 aa13.37□□□□□ -0.27
RANBP3-209ENST00000587411 KIR3DL3Q8N743 410 aa13.37□□□□□ -0.27
RANBP3-209ENST00000587411 URB1-AS1Q96HZ7 61 aa13.37□□□□□ -0.27
RANBP3-209ENST00000587411 MLANAQ16655 118 aa13.37□□□□□ -0.27
RANBP3-209ENST00000587411 TMEM30BQ3MIR4 351 aa13.37□□□□□ -0.27
RANBP3-209ENST00000587411 TMEM164Q5U3C3 297 aa13.37□□□□□ -0.27
RANBP3-209ENST00000587411 C10orf113Q5VZT2 155 aa13.37□□□□□ -0.27
RANBP3-209ENST00000587411 PRR27Q6MZM9 219 aa13.37□□□□□ -0.27
RANBP3-209ENST00000587411 SYS1-DBNDD2H3BUS1 97 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 MPV17L2Q567V2 206 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 SLC25A34Q6PIV7 304 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 C12orf54Q6X4T0 127 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 CNEP1R1Q8N9A8 125 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 TMEM178AQ8NBL3 297 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 OR2T6Q8NHC8 308 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 PYYP10082 97 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 TMEM191AQ9H0A3 160 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 TNRC18O15417 2968 aaPredicted RBP13.36□□□□□ -0.27
RANBP3-209ENST00000587411 HSBP1L1C9JCN9 74 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 TAX1BP3O14907 124 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 ERHP84090 104 aaKnown RBP13.36□□□□□ -0.27
RANBP3-209ENST00000587411 CT83Q5H943 113 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 ASPHD1Q5U4P2 390 aa13.36□□□□□ -0.27
RANBP3-209ENST00000587411 SRRM4A7MD48 611 aaKnown RBP13.35□□□□□ -0.27
RANBP3-209ENST00000587411 INS-IGF2F8WCM5 200 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 OR5AL1P0C617 328 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 CT45A6P0DMU7 189 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 CT45A5P0DMU8 189 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 CT45A7P0DMV0 189 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 SSX8Q7RTT4 187 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 DEFB125Q8N687 156 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 ZNF430Q9H8G1 570 aaPredicted RBP13.35□□□□□ -0.27
RANBP3-209ENST00000587411 WASHC3Q9Y3C0 194 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 IGHV1-18A0A0C4DH31 117 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 TOX4O94842 621 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 LEPROTL1O95214 131 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 LHBP01229 141 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 IGKV1-16P04430 117 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 SAA1P0DJI8 122 aaPredicted RBP13.35□□□□□ -0.27
RANBP3-209ENST00000587411 MYCNOSP40205 109 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 BVES-AS1Q5T3Y7 98 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 FXYD5Q96DB9 178 aa13.35□□□□□ -0.27
RANBP3-209ENST00000587411 RPP21Q9H633 154 aaKnown RBP13.35□□□□□ -0.27
RANBP3-209ENST00000587411 IGHV1-24A0A0C4DH33 117 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 A8MWL6 223 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 VWC2LB2RUY7 222 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 HLA-DRB1P01911 266 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 RNF151Q2KHN1 245 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 MOGAT3Q86VF5 341 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 STXBP6Q8NFX7 210 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 NDUFA4L2Q9NRX3 87 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 EPDR1Q9UM22 224 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 KLF12Q9Y4X4 402 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 CORTO00230 105 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 NUDT3O95989 172 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 KIR2DL2P43627 348 aaPredicted RBP13.34□□□□□ -0.27
RANBP3-209ENST00000587411 SLC25A48Q6ZT89 311 aaKnown RBP13.34□□□□□ -0.27
RANBP3-209ENST00000587411 OSR1Q8TAX0 266 aaPredicted RBP13.34□□□□□ -0.27
RANBP3-209ENST00000587411 ST6GALNAC6Q969X2 333 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 GPR82Q96P67 336 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 LINC00574Q9H8X3 128 aa13.34□□□□□ -0.27
RANBP3-209ENST00000587411 TCRBV4S1A1TA0A5B7 111 aa13.33□□□□□ -0.28
RANBP3-209ENST00000587411 OR10W1Q8NGF6 305 aa13.33□□□□□ -0.28
RANBP3-209ENST00000587411 LIPFP07098 398 aa13.33□□□□□ -0.28
RANBP3-209ENST00000587411 PET117Q6UWS5 81 aa13.33□□□□□ -0.28
RANBP3-209ENST00000587411 ZNF841Q6ZN19 808 aa13.33□□□□□ -0.28
RANBP3-209ENST00000587411 PDPNQ86YL7 162 aa13.33□□□□□ -0.28
RANBP3-209ENST00000587411 MS4A6AQ9H2W1 248 aa13.33□□□□□ -0.28
RANBP3-209ENST00000587411 PATE2Q6UY27 113 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 UBALD2Q8IYN6 164 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 FAM169BQ8N8A8 192 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 FAM222BQ8WU58 562 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 PRSS22Q9GZN4 317 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 GFRA4Q9GZZ7 299 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 ZNF492Q9P255 531 aa13.32□□□□□ -0.28
RANBP3-209ENST00000587411 SH2D7A6NKC9 451 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms