RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 IL34Q6ZMJ4 242 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 BCL6BQ8N143 479 aaPredicted RBP8.04□□□□□ -1.12
APOC1-201ENST00000586638 C5orf56Q8N8D9 126 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 ZNF709Q8N972 641 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 OR2T6Q8NHC8 308 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 PIFOQ8TCI5 191 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 RNASEH2CQ8TDP1 164 aaKnown RBP8.04□□□□□ -1.12
APOC1-201ENST00000586638 ACY3Q96HD9 319 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 MEGF9Q9H1U4 602 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 TMEM231Q9H6L2 316 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 NPVFQ9HCQ7 196 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 RPRMQ9NS64 109 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 C1RLQ9NZP8 487 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 MRPL36Q9P0J6 103 aaKnown RBP8.04□□□□□ -1.12
APOC1-201ENST00000586638 MOB4Q9Y3A3 225 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 LSM4Q9Y4Z0 139 aaKnown RBP8.04□□□□□ -1.12
APOC1-201ENST00000586638 DMRT1Q9Y5R6 373 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 PXMP4Q9Y6I8 212 aa8.04□□□□□ -1.12
APOC1-201ENST00000586638 TCF21O43680 179 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 MPDU1O75352 247 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 TSPAN15O95858 294 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 CTRB1P17538 263 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 RND2P52198 227 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 SERF2P84101 59 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 GCSAMLQ5JQS6 135 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 CTRB2Q6GPI1 263 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 SPSB3Q6PJ21 355 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 C12orf54Q6X4T0 127 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 TMEM144Q7Z5S9 345 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 CENPVQ7Z7K6 275 aaPredicted RBP8.03□□□□□ -1.12
APOC1-201ENST00000586638 OR1P1Q8NH06 330 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 C22orf15Q8WYQ4 148 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 MARC2Q969Z3 335 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 RCC1LQ96I51 464 aaKnown RBP8.03□□□□□ -1.12
APOC1-201ENST00000586638 RBM14Q96PK6 669 aaKnown RBP8.03□□□□□ -1.12
APOC1-201ENST00000586638 SRSF8Q9BRL6 282 aaKnown RBP8.03□□□□□ -1.12
APOC1-201ENST00000586638 WNT10AQ9GZT5 417 aa8.03□□□□□ -1.12
APOC1-201ENST00000586638 IGKV1OR2-108A0A075B7D4 117 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 A6NDX4 124 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 ATP6V0E1O15342 81 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 YIF1AO95070 293 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 MT-CO2P00403 227 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 H2AFB1P0C5Y9 115 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 EGR2P11161 476 aaPredicted RBP8.02□□□□□ -1.13
APOC1-201ENST00000586638 OR10J1P30954 320 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 GPX4P36969 197 aaPredicted RBP8.02□□□□□ -1.13
APOC1-201ENST00000586638 SRP14P37108 136 aaKnown RBP8.02□□□□□ -1.13
APOC1-201ENST00000586638 FGF8P55075 233 aaPredicted RBP8.02□□□□□ -1.13
APOC1-201ENST00000586638 B2MP61769 119 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 SRSF3P84103 164 aaKnown RBP8.02□□□□□ -1.13
APOC1-201ENST00000586638 DEFA5Q01523 94 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 ECSCRQ19T08 205 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 DEFB112Q30KQ8 113 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 ACOT6Q3I5F7 207 aaPredicted RBP8.02□□□□□ -1.13
APOC1-201ENST00000586638 PVRIGQ6DKI7 326 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 TEPPQ6URK8 271 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 LCN15Q6UWW0 184 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 ZNF562Q6V9R5 426 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 LYPD6BQ8NI32 183 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 LINC00052Q96N35 136 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 MEGF8Q7Z7M0 2845 aa8.02□□□□□ -1.13
APOC1-201ENST00000586638 RAB19A4D1S5 217 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 MAP1LC3B2A6NCE7 125 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 NPIPB5A8MRT5 1133 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 CORTO00230 105 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 HMGB3O15347 200 aaKnown RBP8.01□□□□□ -1.13
APOC1-201ENST00000586638 CDC34P49427 236 aaPredicted RBP8.01□□□□□ -1.13
APOC1-201ENST00000586638 CCL20P78556 96 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 RPP25LQ8N5L8 163 aaKnown RBP8.01□□□□□ -1.13
APOC1-201ENST00000586638 EIF4E3Q8N5X7 224 aaKnown RBP8.01□□□□□ -1.13
APOC1-201ENST00000586638 STPG3Q8N7X2 389 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 LFNGQ8NES3 379 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 BPIFCQ8NFQ6 507 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 OR10G4Q8NGN3 311 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 OR10G9Q8NGN4 311 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 OR10G7Q8NGN6 311 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 SFT2D1Q8WV19 159 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 CACNG8Q8WXS5 425 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 NPIPB3Q92617 1050 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 MAP1LC3BQ9GZQ8 125 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 KCNIP2Q9NS61 270 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 SLC45A2Q9UMX9 530 aa8.01□□□□□ -1.13
APOC1-201ENST00000586638 IGKV1D-37A0A075B6S9 117 aa8□□□□□ -1.13
APOC1-201ENST00000586638 CTXND1A0A1B0GTU2 59 aa8□□□□□ -1.13
APOC1-201ENST00000586638 LINC01548A6NM66 108 aa8□□□□□ -1.13
APOC1-201ENST00000586638 NUDT19A8MXV4 375 aa8□□□□□ -1.13
APOC1-201ENST00000586638 I3L2K1 104 aa8□□□□□ -1.13
APOC1-201ENST00000586638 HBE1P02100 147 aa8□□□□□ -1.13
APOC1-201ENST00000586638 MBP02144 154 aa8□□□□□ -1.13
APOC1-201ENST00000586638 AMY1AP04745 511 aa8□□□□□ -1.13
APOC1-201ENST00000586638 CRYGCP07315 174 aa8□□□□□ -1.13
APOC1-201ENST00000586638 M6PRP20645 277 aa8□□□□□ -1.13
APOC1-201ENST00000586638 ZP3P21754 424 aa8□□□□□ -1.13
APOC1-201ENST00000586638 GATA2P23769 480 aaPredicted RBP8□□□□□ -1.13
APOC1-201ENST00000586638 PRR20EP86478 221 aa8□□□□□ -1.13
APOC1-201ENST00000586638 PRR20CP86479 221 aa8□□□□□ -1.13
APOC1-201ENST00000586638 PRR20DP86480 221 aa8□□□□□ -1.13
APOC1-201ENST00000586638 PRR20BP86481 221 aa8□□□□□ -1.13
APOC1-201ENST00000586638 PRR20AP86496 221 aa8□□□□□ -1.13
APOC1-201ENST00000586638 C9orf152Q5JTZ5 239 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms