RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 NCBP2LA6PVI3 153 aaKnown RBP16.18■□□□□ 0.18
ATG4D-204ENST00000586417 FXYD3Q14802 87 aa16.18■□□□□ 0.18
ATG4D-204ENST00000586417 ACOT6Q3I5F7 207 aaPredicted RBP16.18■□□□□ 0.18
ATG4D-204ENST00000586417 Q8N9W7 124 aa16.18■□□□□ 0.18
ATG4D-204ENST00000586417 OR2T6Q8NHC8 308 aa16.18■□□□□ 0.18
ATG4D-204ENST00000586417 DMRT1Q9Y5R6 373 aa16.18■□□□□ 0.18
ATG4D-204ENST00000586417 EIF3GO75821 320 aaKnown RBP eCLIP16.18■□□□□ 0.18
ATG4D-204ENST00000586417 RPL29P47914 159 aaKnown RBP16.18■□□□□ 0.18
ATG4D-204ENST00000586417 ZNF562Q6V9R5 426 aa16.18■□□□□ 0.18
ATG4D-204ENST00000586417 SLC25A22Q9H936 323 aa16.18■□□□□ 0.18
ATG4D-204ENST00000586417 KCNIP2Q9NS61 270 aa16.18■□□□□ 0.18
ATG4D-204ENST00000586417 CTXND1A0A1B0GTU2 59 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 MAP1LC3B2A6NCE7 125 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 CRYGCP07315 174 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 DEFA4P12838 97 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 CX3CL1P78423 397 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 PRR20EP86478 221 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 PRR20CP86479 221 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 PRR20DP86480 221 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 PRR20BP86481 221 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 PRR20AP86496 221 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 NDPQ00604 133 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 RAB31Q13636 194 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 C10orf91Q5T1B1 145 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 SLC35E1Q96K37 410 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 PBDC1Q9BVG4 233 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 MAP1LC3BQ9GZQ8 125 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 SLC45A2Q9UMX9 530 aa16.17■□□□□ 0.18
ATG4D-204ENST00000586417 TEP1Q99973 2627 aaKnown RBP16.16■□□□□ 0.18
ATG4D-204ENST00000586417 SEC14L6B5MCN3 397 aa16.16■□□□□ 0.18
ATG4D-204ENST00000586417 FGF8P55075 233 aaPredicted RBP16.16■□□□□ 0.18
ATG4D-204ENST00000586417 FAM122CQ6P4D5 195 aa16.16■□□□□ 0.18
ATG4D-204ENST00000586417 CCDC28AQ8IWP9 274 aa16.16■□□□□ 0.18
ATG4D-204ENST00000586417 STPG3Q8N7X2 389 aa16.16■□□□□ 0.18
ATG4D-204ENST00000586417 ACTR3CQ9C0K3 210 aaPredicted RBP16.16■□□□□ 0.18
ATG4D-204ENST00000586417 EIF5A2Q9GZV4 153 aaKnown RBP16.16■□□□□ 0.18
ATG4D-204ENST00000586417 MEGF9Q9H1U4 602 aa16.16■□□□□ 0.18
ATG4D-204ENST00000586417 SLC39A9Q9NUM3 307 aa16.16■□□□□ 0.18
ATG4D-204ENST00000586417 MRPL36Q9P0J6 103 aaKnown RBP16.16■□□□□ 0.18
ATG4D-204ENST00000586417 LINC00869P0C866 280 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 CTRB1P17538 263 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 B2MP61769 119 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 PEA15Q15121 130 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 CTRB2Q6GPI1 263 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 ABHD5Q8WTS1 349 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 RAB24Q969Q5 203 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 MISP3Q96FF7 219 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 ACY3Q96HD9 319 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 RARRES2Q99969 163 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 FAM103A1Q9BTL3 118 aaKnown RBP16.15■□□□□ 0.18
ATG4D-204ENST00000586417 C1RLQ9NZP8 487 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 MDFIC2A0A1B0GVS7 189 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 RBFOX3A6NFN3 312 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 CYB5BO43169 146 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 OR10J1P30954 320 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 PIFOQ8TCI5 191 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 ARPC1AQ92747 370 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 CUBNO60494 3623 aa16.15■□□□□ 0.18
ATG4D-204ENST00000586417 IGHV3-48P01763 117 aa16.14■□□□□ 0.17
ATG4D-204ENST00000586417 SFTA3P0C7M3 94 aa16.14■□□□□ 0.17
ATG4D-204ENST00000586417 BPIFB3P59826 476 aa16.14■□□□□ 0.17
ATG4D-204ENST00000586417 ASPHD1Q5U4P2 390 aa16.14■□□□□ 0.17
ATG4D-204ENST00000586417 CARHSP1Q9Y2V2 147 aaKnown RBP16.14■□□□□ 0.17
ATG4D-204ENST00000586417 IGHV7-81A0A0B4J1V7 117 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 CORTO00230 105 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 HMGB3O15347 200 aaKnown RBP16.13■□□□□ 0.17
ATG4D-204ENST00000586417 HLA-DRB1P01911 266 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 APOC3P02656 99 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 CDC34P49427 236 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-204ENST00000586417 ZNF506Q5JVG8 444 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 THAP8Q8NA92 274 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 WNT10AQ9GZT5 417 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 NIPBLQ6KC79 2804 aaeCLIP16.13■□□□□ 0.17
ATG4D-204ENST00000586417 IGKV1D-37A0A075B6S9 117 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 F8W036 122 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 HAGHQ16775 308 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 DEFB112Q30KQ8 113 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 ETFRF1Q6IPR1 90 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 NPIPB3Q92617 1050 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 SLC25A33Q9BSK2 321 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 SEC11CQ9BY50 192 aa16.13■□□□□ 0.17
ATG4D-204ENST00000586417 EGR2P11161 476 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-204ENST00000586417 SRP14P37108 136 aaKnown RBP16.12■□□□□ 0.17
ATG4D-204ENST00000586417 RND2P52198 227 aa16.12■□□□□ 0.17
ATG4D-204ENST00000586417 PMS2P11Q13670 270 aa16.12■□□□□ 0.17
ATG4D-204ENST00000586417 ICAM4Q14773 271 aa16.12■□□□□ 0.17
ATG4D-204ENST00000586417 SMDT1Q9H4I9 107 aa16.12■□□□□ 0.17
ATG4D-204ENST00000586417 TMEM160Q9NX00 188 aa16.12■□□□□ 0.17
ATG4D-204ENST00000586417 GNG13Q9P2W3 67 aa16.12■□□□□ 0.17
ATG4D-204ENST00000586417 LOC102723971A0A1B0GUV8 181 aa16.11■□□□□ 0.17
ATG4D-204ENST00000586417 SCO1O75880 301 aa16.11■□□□□ 0.17
ATG4D-204ENST00000586417 FBP1P09467 338 aa16.11■□□□□ 0.17
ATG4D-204ENST00000586417 GATA2P23769 480 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-204ENST00000586417 PPT1P50897 306 aa16.11■□□□□ 0.17
ATG4D-204ENST00000586417 C9orf139Q6ZV77 190 aa16.11■□□□□ 0.17
ATG4D-204ENST00000586417 HSPB9Q9BQS6 159 aa16.11■□□□□ 0.17
ATG4D-204ENST00000586417 FN1P02751 2386 aaKnown RBP16.11■□□□□ 0.17
ATG4D-204ENST00000586417 NPIPB5A8MRT5 1133 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 I3L2K1 104 aa16.1■□□□□ 0.17
ATG4D-204ENST00000586417 MT-CO2P00403 227 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms