RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 UPK2O00526 184 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 GPX4P36969 197 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 C2orf83Q53S99 150 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 C9orf152Q5JTZ5 239 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 TEX38Q6PEX7 206 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 LY6G5BQ8NDX9 201 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 SGMS2Q8NHU3 365 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 C10orf105Q8TEF2 133 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PLEKHA3Q9HB20 300 aa12.1□□□□□ -0.47
CDK5RAP3-236ENST00000584991 FBN2P35556 2912 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 J3QR06 171 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 CA2P00918 260 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 IGHV1-8P0DP01 117 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 LMO4P61968 165 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 COX19Q49B96 90 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 CDPF1Q6NVV7 123 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 PQLC2Q6ZP29 291 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 LYG1Q8N1E2 194 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 OR1L8Q8NGR8 309 aa12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 OSR1Q8TAX0 266 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-236ENST00000584991 TRBV9A0A0B4J1U6 114 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 NDUFS8O00217 210 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 LIPFP07098 398 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 DEFA4P12838 97 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ZFP36P26651 326 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 C1orf229Q6ZS94 237 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 GBGT1Q8N5D6 347 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 BEND2Q8NDZ0 799 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OCC1Q8TAD7 63 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CACNG8Q8WXS5 425 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 RNF2Q99496 336 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 IL36BQ9NZH7 164 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ZNRD1Q9P1U0 126 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ONECUT1Q9UBC0 465 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 HELZ2Q9BYK8 2649 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 TACC2O95359 2948 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 TRBV20OR9-2A0A075B6H5 130 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OR10J4P0C629 311 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 DLX1P56177 255 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 TAS2R45P59539 299 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 SELENOTP62341 195 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 IQCJQ1A5X6 159 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 C14orf144Q96I85 54 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 DERL1Q9BUN8 251 aa12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 SEPSECSQ9HD40 501 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 TECRQ9NZ01 308 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-236ENST00000584991 IGHV4-30-2A0A087WSY4 118 aa12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 A0A087X0M5 115 aa12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 A0A1B0GX30 115 aa12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 VWC2LB2RUY7 222 aa12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 LINC00869P0C866 280 aa12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 FAM71F2Q6NXP2 309 aa12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 C8orf31Q8N9H6 132 aa12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 SSMEM1Q8WWF3 244 aa12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 YTHDF2Q9Y5A9 579 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CELSR2Q9HCU4 2923 aa12.07□□□□□ -0.48
CDK5RAP3-236ENST00000584991 SCO2A0A1W2PP80 73 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CT45A6P0DMU7 189 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CT45A5P0DMU8 189 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CT45A7P0DMV0 189 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ARF6P62330 175 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ZNF833PQ6ZTB9 187 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OR5T1Q8NG75 326 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OR4A5Q8NH83 315 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 TMEM133Q9H2Q1 129 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 SLC35D1Q9NTN3 355 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 IGHV4-61A0A0C4DH41 118 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 A8MWP6 167 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 RBP4P02753 201 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 PAFAH1B2P68402 229 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ZNF114Q8NC26 417 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OR4P4Q8NGL7 312 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 NABP2Q9BQ15 211 aa12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 MRPL32Q9BYC8 188 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-236ENST00000584991 MED13LQ71F56 2210 aa12.05□□□□□ -0.48
CDK5RAP3-236ENST00000584991 TEX50A0A1B0GTY4 177 aa12.05□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OR5G3P0C626 314 aa12.05□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ESDP10768 282 aa12.05□□□□□ -0.48
CDK5RAP3-236ENST00000584991 DSCR9P59020 149 aa12.05□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CLEC12BQ2HXU8 276 aa12.05□□□□□ -0.48
CDK5RAP3-236ENST00000584991 EAF1Q96JC9 268 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-236ENST00000584991 A0A1W2PRE2 83 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 HELTA6NFD8 242 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 APOA2P02652 100 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 RD3LP0DJH9 198 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 TMEM177Q53S58 311 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OR9G1Q8NH87 305 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ZNF596Q8TC21 504 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 BEX4Q9NWD9 120 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 PTPN13Q12923 2485 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CSMD2Q7Z408 3487 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 M0R1W7 72 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ENSAO43768 121 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 USF1P22415 310 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ERHP84090 104 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 PAX2Q02962 417 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ZNF90Q03938 601 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 RPEL1Q2QD12 228 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 DEFB113Q30KQ7 82 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms