RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 LGI3Q8N145 548 aa13.35□□□□□ -0.27
ERBB2-221ENST00000584888 ENY2Q9NPA8 101 aa13.35□□□□□ -0.27
ERBB2-221ENST00000584888 MRPL36Q9P0J6 103 aaKnown RBP13.35□□□□□ -0.27
ERBB2-221ENST00000584888 TMEM50AO95807 157 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 HTR2BP41595 481 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 SRPXP78539 464 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 MLANAQ16655 118 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 C2orf83Q53S99 150 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 LRTM2Q8N967 370 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 DUSP18Q8NEJ0 188 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 TMEM170AQ8WVE7 144 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 HIPK2Q9H2X6 1198 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 RETNQ9HD89 108 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 CACFD1Q9UGQ2 172 aa13.34□□□□□ -0.27
ERBB2-221ENST00000584888 IGHV3OR16-8A0A075B7F1 116 aa13.33□□□□□ -0.28
ERBB2-221ENST00000584888 RBMY1BA6NDE4 496 aaKnown RBP13.33□□□□□ -0.28
ERBB2-221ENST00000584888 RBMY1EA6NEQ0 496 aaKnown RBP13.33□□□□□ -0.28
ERBB2-221ENST00000584888 GNG7O60262 68 aa13.33□□□□□ -0.28
ERBB2-221ENST00000584888 RBMY1DP0C7P1 496 aaKnown RBP13.33□□□□□ -0.28
ERBB2-221ENST00000584888 ANXA3P12429 323 aa13.33□□□□□ -0.28
ERBB2-221ENST00000584888 NPBWR1P48145 328 aa13.33□□□□□ -0.28
ERBB2-221ENST00000584888 CCR6P51684 374 aa13.33□□□□□ -0.28
ERBB2-221ENST00000584888 SMCO1Q147U7 214 aa13.33□□□□□ -0.28
ERBB2-221ENST00000584888 TMED4Q7Z7H5 227 aa13.33□□□□□ -0.28
ERBB2-221ENST00000584888 HSPB7Q9UBY9 170 aa13.33□□□□□ -0.28
ERBB2-221ENST00000584888 SMPXQ9UHP9 88 aa13.33□□□□□ -0.28
ERBB2-221ENST00000584888 DUXBA0A1W2PPF3 345 aa13.32□□□□□ -0.28
ERBB2-221ENST00000584888 OR11H12B2RN74 326 aa13.32□□□□□ -0.28
ERBB2-221ENST00000584888 TSPAN4O14817 238 aa13.32□□□□□ -0.28
ERBB2-221ENST00000584888 ZNF207O43670 478 aaKnown RBP13.32□□□□□ -0.28
ERBB2-221ENST00000584888 PITX3O75364 302 aa13.32□□□□□ -0.28
ERBB2-221ENST00000584888 SCAF4O95104 1147 aaKnown RBP13.32□□□□□ -0.28
ERBB2-221ENST00000584888 TNFRSF9Q07011 255 aa13.32□□□□□ -0.28
ERBB2-221ENST00000584888 ANKRD55Q3KP44 614 aa13.32□□□□□ -0.28
ERBB2-221ENST00000584888 OR4X1Q8NH49 305 aa13.32□□□□□ -0.28
ERBB2-221ENST00000584888 C20orf24Q9BUV8 137 aa13.32□□□□□ -0.28
ERBB2-221ENST00000584888 WFDC10AQ9H1F0 79 aa13.32□□□□□ -0.28
ERBB2-221ENST00000584888 HEYLQ9NQ87 328 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-221ENST00000584888 A0A1B0GU03 582 aa13.31□□□□□ -0.28
ERBB2-221ENST00000584888 NAP1L6A6NFF2 107 aa13.31□□□□□ -0.28
ERBB2-221ENST00000584888 CEBPZOSA8MTT3 80 aa13.31□□□□□ -0.28
ERBB2-221ENST00000584888 CLN5O75503 358 aa13.31□□□□□ -0.28
ERBB2-221ENST00000584888 SFT2D2O95562 160 aa13.31□□□□□ -0.28
ERBB2-221ENST00000584888 PPP1R1AQ13522 171 aa13.31□□□□□ -0.28
ERBB2-221ENST00000584888 RBMS2Q15434 407 aaKnown RBP13.31□□□□□ -0.28
ERBB2-221ENST00000584888 TOMM20LQ6UXN7 152 aa13.31□□□□□ -0.28
ERBB2-221ENST00000584888 FAM110AQ9BQ89 295 aa13.31□□□□□ -0.28
ERBB2-221ENST00000584888 SRD5A3Q9H8P0 318 aa13.31□□□□□ -0.28
ERBB2-221ENST00000584888 PIGBOS1A0A0B4J2F0 54 aa13.3□□□□□ -0.28
ERBB2-221ENST00000584888 IGHV7-4-1A0A0J9YVY3 117 aa13.3□□□□□ -0.28
ERBB2-221ENST00000584888 CHEK1O14757 476 aa13.3□□□□□ -0.28
ERBB2-221ENST00000584888 NDUFB6O95139 128 aa13.3□□□□□ -0.28
ERBB2-221ENST00000584888 BTCP35070 178 aa13.3□□□□□ -0.28
ERBB2-221ENST00000584888 UBE2MP61081 183 aaKnown RBP13.3□□□□□ -0.28
ERBB2-221ENST00000584888 ZNF600Q6ZNG1 722 aa13.3□□□□□ -0.28
ERBB2-221ENST00000584888 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
ERBB2-221ENST00000584888 CENPSQ8N2Z9 138 aa13.3□□□□□ -0.28
ERBB2-221ENST00000584888 SLC24A4Q8NFF2 622 aa13.3□□□□□ -0.28
ERBB2-221ENST00000584888 RNASEH2CQ8TDP1 164 aaKnown RBP13.3□□□□□ -0.28
ERBB2-221ENST00000584888 SPAG8Q99932 426 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-221ENST00000584888 ZFAND3Q9H8U3 227 aa13.3□□□□□ -0.28
ERBB2-221ENST00000584888 DYNC2H1Q8NCM8 4307 aaKnown RBP13.3□□□□□ -0.28
ERBB2-221ENST00000584888 IGKV1-17P01599 117 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 SLC25A6P12236 298 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 OPRK1P41145 380 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 TRIQKQ629K1 86 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 FAM90A2PQ658T7 463 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 SLC16A13Q7RTY0 426 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 TMEM116Q8NCL8 245 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 RHPN1-AS1Q9BWJ2 59 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 RBKSQ9H477 322 aa13.29□□□□□ -0.28
ERBB2-221ENST00000584888 TRAV14DV4A0A0A6YYC5 116 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 YIF1AO95070 293 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 NXPH3O95157 252 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 IL7P13232 177 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 VAMP1P23763 118 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 LAMTOR1Q6IAA8 161 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 PRSS54Q6PEW0 395 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 RNF2Q99496 336 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 C7orf50Q9BRJ6 194 aaKnown RBP13.28□□□□□ -0.28
ERBB2-221ENST00000584888 VSIRQ9H7M9 311 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 PUS1Q9Y606 427 aaKnown RBP eCLIP13.28□□□□□ -0.28
ERBB2-221ENST00000584888 U3KQ87 197 aa13.28□□□□□ -0.28
ERBB2-221ENST00000584888 RPS10-NUDT3A0A1W2PQS6 291 aa13.27□□□□□ -0.29
ERBB2-221ENST00000584888 SLC25A4P12235 298 aa13.27□□□□□ -0.29
ERBB2-221ENST00000584888 NPY1RP25929 384 aa13.27□□□□□ -0.29
ERBB2-221ENST00000584888 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
ERBB2-221ENST00000584888 DTD1Q8TEA8 209 aa13.27□□□□□ -0.29
ERBB2-221ENST00000584888 FLVCR2Q9UPI3 526 aa13.27□□□□□ -0.29
ERBB2-221ENST00000584888 TMED3Q9Y3Q3 217 aa13.27□□□□□ -0.29
ERBB2-221ENST00000584888 TRAV30A0A087WSZ9 112 aa13.26□□□□□ -0.29
ERBB2-221ENST00000584888 C9orf170A2RU37 121 aa13.26□□□□□ -0.29
ERBB2-221ENST00000584888 PLA2G10O15496 165 aa13.26□□□□□ -0.29
ERBB2-221ENST00000584888 APOHP02749 345 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-221ENST00000584888 IGLC1P0CG04 106 aa13.26□□□□□ -0.29
ERBB2-221ENST00000584888 INPP1P49441 399 aa13.26□□□□□ -0.29
ERBB2-221ENST00000584888 ATP5IP56385 69 aaPredicted RBP13.26□□□□□ -0.29
ERBB2-221ENST00000584888 LILRB2Q8N423 598 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms