RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 CCNKO75909 580 aa12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 MT-CO2P00403 227 aa12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 IFNA4P05014 189 aa12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 CD33P20138 364 aa12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 P2RY1P47900 373 aa12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 CAV2P51636 162 aa12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 EXOSC2Q13868 293 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 THAP6Q8TBB0 222 aa12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 PINX1Q96BK5 328 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 ST6GAL2Q96JF0 529 aa12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 GNB4Q9HAV0 340 aa12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
CSNK1D-223ENST00000584472 MFSD2BA6NFX1 497 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 FAM24AA6NFZ4 105 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 METTL15P1P0C7V9 234 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 OPRK1P41145 380 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 ATP5G2Q06055 141 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 FHL3Q13643 280 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 DEFB136Q30KP8 78 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 TMEM252Q8N6L7 170 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 VN1R17PQ8TDU5 208 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 SCARB1Q8WTV0 552 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 CXorf58Q96LI9 332 aa12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 FNDC4Q9H6D8 234 aaPredicted RBP12.33□□□□□ -0.44
CSNK1D-223ENST00000584472 IGHV3-21A0A0B4J1V1 117 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 PRSS46E5RG02 174 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 SMLR1H3BR10 107 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 IGHV3-11P01762 117 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 LGALS1P09382 135 aaKnown RBP12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 SLC25A4P12235 298 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 CD69Q07108 199 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 MLANAQ16655 118 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 AKAP14Q86UN6 197 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 DCUN1D4Q92564 292 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 EEF1AKMT3Q96AZ1 226 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 RCC1LQ96I51 464 aaKnown RBP12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 S4R3C0 116 aa12.32□□□□□ -0.44
CSNK1D-223ENST00000584472 RPS10-NUDT3A0A1W2PQS6 291 aa12.31□□□□□ -0.44
CSNK1D-223ENST00000584472 IGSF23A1L1A6 192 aa12.31□□□□□ -0.44
CSNK1D-223ENST00000584472 G3V4G9 280 aa12.31□□□□□ -0.44
CSNK1D-223ENST00000584472 IGHV3-48P01763 117 aa12.31□□□□□ -0.44
CSNK1D-223ENST00000584472 OR8G2PQ6IF36 304 aa12.31□□□□□ -0.44
CSNK1D-223ENST00000584472 ZNF343Q6P1L6 599 aa12.31□□□□□ -0.44
CSNK1D-223ENST00000584472 TCTE3Q8IZS6 198 aa12.31□□□□□ -0.44
CSNK1D-223ENST00000584472 DUX3Q96PT4 197 aa12.31□□□□□ -0.44
CSNK1D-223ENST00000584472 TRBV7-1A0A0A6YYK4 115 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 SCAF4O95104 1147 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 IGHV3-23P01764 117 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 GPX4P36969 197 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 SULT1A1P50225 295 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 ZNF616Q08AN1 781 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 ETFRF1Q6IPR1 90 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 OR11H1Q8NG94 326 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 OR10P1Q8NGE3 313 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 OR1N2Q8NGR9 330 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 ZNF502Q8TBZ5 544 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 CCDC140Q96MF4 163 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 OR5B12Q96R08 314 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 GPR61Q9BZJ8 451 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 SLC25A31Q9H0C2 315 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 C21orf62Q9NYP8 219 aa12.3□□□□□ -0.44
CSNK1D-223ENST00000584472 F8W735 103 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 CST7O76096 145 aa12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 RPL12P30050 165 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 FCGR2BP31994 310 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 MFAP4P55083 255 aa12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 EWSR1Q01844 656 aaKnown RBP eCLIP12.29□□□□□ -0.445e-7■■■□□ 15.7
CSNK1D-223ENST00000584472 SLC16A13Q7RTY0 426 aa12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 STX12Q86Y82 276 aa12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 C1QL4Q86Z23 238 aa12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 CACNG8Q8WXS5 425 aa12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 MCRIP2Q9BUT9 160 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 MRPL36Q9P0J6 103 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-223ENST00000584472 FXYD6-FXYD2A0A087WZ82 144 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 NHLH2Q02577 135 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 BAXQ07812 192 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 CD300CQ08708 224 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 OXLD1Q5BKU9 147 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 FAM209BQ5JX69 171 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 ACSM6Q6P461 480 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 CLEC19AQ6UXS0 136 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 ACOT7LQ6ZUV0 252 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 ZNF546Q86UE3 836 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 OR4X1Q8NH49 305 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 DPF1Q92782 380 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 TXN2Q99757 166 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 NEURL2Q9BR09 285 aa12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 PEF1Q9UBV8 284 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-223ENST00000584472 ANKRD34BA5PLL1 514 aa12.27□□□□□ -0.45
CSNK1D-223ENST00000584472 LINC01619G3V211 115 aa12.27□□□□□ -0.45
CSNK1D-223ENST00000584472 TRBV12-3P01733 135 aa12.27□□□□□ -0.45
CSNK1D-223ENST00000584472 HSPB1P04792 205 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-223ENST00000584472 IGLL1P15814 213 aa12.27□□□□□ -0.45
CSNK1D-223ENST00000584472 GPR183P32249 361 aa12.27□□□□□ -0.45
CSNK1D-223ENST00000584472 DLK1P80370 383 aa12.27□□□□□ -0.45
CSNK1D-223ENST00000584472 SLC38A11Q08AI6 406 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms