RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 SPANXN5Q5MJ07 72 aa7.2□□□□□ -1.26
UBBP4-201ENST00000583708 PRR31Q5SQ13 230 aa7.2□□□□□ -1.26
UBBP4-201ENST00000583708 PRSS54Q6PEW0 395 aa7.2□□□□□ -1.26
UBBP4-201ENST00000583708 LCNL1Q6ZST4 164 aa7.2□□□□□ -1.26
UBBP4-201ENST00000583708 C11orf44Q8N8P7 122 aa7.2□□□□□ -1.26
UBBP4-201ENST00000583708 THAP6Q8TBB0 222 aa7.2□□□□□ -1.26
UBBP4-201ENST00000583708 SLC35E1Q96K37 410 aa7.2□□□□□ -1.26
UBBP4-201ENST00000583708 C11orf1Q9H5F2 150 aa7.2□□□□□ -1.26
UBBP4-201ENST00000583708 GNB4Q9HAV0 340 aa7.2□□□□□ -1.26
UBBP4-201ENST00000583708 LYRM2Q9NU23 88 aaPredicted RBP7.2□□□□□ -1.26
UBBP4-201ENST00000583708 RCL1Q9Y2P8 373 aaKnown RBP7.2□□□□□ -1.26
UBBP4-201ENST00000583708 TET2Q6N021 2002 aaPredicted RBP7.19□□□□□ -1.26
UBBP4-201ENST00000583708 LGALS9O00182 355 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 CLN5O75503 358 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 PF4P02776 101 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 IAPPP10997 89 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 S100A7P31151 101 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 NUP62P37198 522 aaPredicted RBP7.19□□□□□ -1.26
UBBP4-201ENST00000583708 INSL3P51460 131 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 DLK1P80370 383 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 KLF5Q13887 457 aaPredicted RBP7.19□□□□□ -1.26
UBBP4-201ENST00000583708 ACSM6Q6P461 480 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 C8orf86Q6ZUL3 223 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 STX12Q86Y82 276 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 OR11H1Q8NG94 326 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 OR11H7Q8NGC8 314 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 OR1S2Q8NGQ3 325 aa7.19□□□□□ -1.26
UBBP4-201ENST00000583708 LSM5Q9Y4Y9 91 aaKnown RBP7.19□□□□□ -1.26
UBBP4-201ENST00000583708 K7EMT4 169 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 NDUFA4O00483 81 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 TGOLN2O43493 480 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 GNG7O60262 68 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 NXPH3O95157 252 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 SIX6O95475 246 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 TMEM50AO95807 157 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 IGHV3-11P01762 117 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 CTSGP08311 255 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 CXCL3P19876 107 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 ARL3P36405 182 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 SULT1A1P50225 295 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 BCAP31P51572 246 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 S100A10P60903 97 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 YPEL3P61236 119 aaPredicted RBP7.18□□□□□ -1.26
UBBP4-201ENST00000583708 RPEL1Q2QD12 228 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 Q56UQ5 140 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 CLEC19AQ6UXS0 136 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 TMEM144Q7Z5S9 345 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 S100A7AQ86SG5 101 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 TMEM170AQ8WVE7 144 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 MARC2Q969Z3 335 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 RAX2Q96IS3 184 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 RNF126Q9BV68 326 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 ELOVL1Q9BW60 279 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 NPVFQ9HCQ7 196 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 SIGLEC8Q9NYZ4 499 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 PEMTQ9UBM1 199 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 PFDN2Q9UHV9 154 aa7.18□□□□□ -1.26
UBBP4-201ENST00000583708 A0A1W2PRX2 142 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 MFSD2BA6NFX1 497 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 PRSS46E5RG02 174 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 MPDU1O75352 247 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 CD5P06127 495 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 CAV2P51636 162 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 SELENOTP62341 195 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 RAB31Q13636 194 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 GAMTQ14353 236 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 C11orf87Q6NUJ2 197 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 ZNF600Q6ZNG1 722 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 SLC16A13Q7RTY0 426 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 REC114Q7Z4M0 266 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 C1QL4Q86Z23 238 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 TMEM252Q8N6L7 170 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 LINC00482Q8N8I6 264 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 THAP8Q8NA92 274 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 RCC1LQ96I51 464 aaKnown RBP7.17□□□□□ -1.26
UBBP4-201ENST00000583708 CCDC140Q96MF4 163 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 OR4C12Q96R67 309 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 FNDC4Q9H6D8 234 aaPredicted RBP7.17□□□□□ -1.26
UBBP4-201ENST00000583708 PAIP2BQ9ULR5 123 aaKnown RBP7.17□□□□□ -1.26
UBBP4-201ENST00000583708 RNF24Q9Y225 148 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 UFC1Q9Y3C8 167 aa7.17□□□□□ -1.26
UBBP4-201ENST00000583708 ANKRD34BA5PLL1 514 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 PMS2P5A8MQ11 134 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 F8W735 103 aaPredicted RBP7.16□□□□□ -1.26
UBBP4-201ENST00000583708 BMPR1BO00238 502 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 OVOL1O14753 267 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 DFFBO76075 338 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 METTL15P1P0C7V9 234 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 HOXD3P31249 432 aaPredicted RBP7.16□□□□□ -1.26
UBBP4-201ENST00000583708 GPR183P32249 361 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 BMI1P35226 326 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 RND2P52198 227 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 C19orf35Q6ZS72 473 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 INO80EQ8NBZ0 244 aaPredicted RBP7.16□□□□□ -1.26
UBBP4-201ENST00000583708 OR2T35Q8NGX2 323 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 Q8WTZ3 238 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 NPIPB3Q92617 1050 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 TRGV9Q99603 122 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 GINS3Q9BRX5 216 aa7.16□□□□□ -1.26
UBBP4-201ENST00000583708 IGHV4OR15-8A0A075B7B6 117 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms