RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 COQ5Q5HYK3 327 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 ZNF563Q8TA94 476 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 SLC7A6Q92536 515 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 FAM96AQ9H5X1 160 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 C8orf4Q9NR00 106 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 PAQR5Q9NXK6 330 aaPredicted RBP1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 ANGPT4Q9Y264 503 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 TIMM22Q9Y584 194 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 COL24A1Q17RW2 1714 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 UBR3Q6ZT12 1888 aa1.62□□□□□ -2.15
SMCHD1-205ENST00000581383 PCNTO95613 3336 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 TRGV2A0A075B6R0 118 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 ZNF737O75373 536 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 NAPSAO96009 420 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 FAM228BP0C875 321 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 MSNP26038 577 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 MYL6P60660 151 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 MAGOHP61326 146 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 ACSM3Q53FZ2 586 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 C9orf64Q5T6V5 341 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 SFXN4Q6P4A7 337 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 C10orf126Q8N4M7 172 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 ACOT12Q8WYK0 555 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 OPTNQ96CV9 577 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 PARD6GQ9BYG4 376 aaPredicted RBP1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 MRPS26Q9BYN8 205 aaKnown RBP1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 XAGE1AQ9HD64 81 aa1.61□□□□□ -2.15
SMCHD1-205ENST00000581383 DUOX1Q9NRD9 1551 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 RIC1Q4ADV7 1423 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 PDE4DIPQ5VU43 2346 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 A0A0D9SEW6 157 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 INMT-MINDY4F8WBC2 141 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 KCNE1P15382 129 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 HLA-DMBP28068 263 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 RAB5BP61020 215 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 FAM201AQ5SY85 155 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 OR5B17Q8NGF7 314 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 ANKRD7Q92527 254 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 CNBD2Q96M20 576 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 MRPL32Q9BYC8 188 aaKnown RBP1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 OR8D2Q9GZM6 311 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 CST9LQ9H4G1 147 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 FUT9Q9Y231 359 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 TAF1LQ8IZX4 1826 aa1.6□□□□□ -2.15
SMCHD1-205ENST00000581383 BCORQ6W2J9 1755 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 CCDC88CQ9P219 2028 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 ANKRD31Q8N7Z5 1873 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 IGKV2-29A2NJV5 120 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 E2F6O75461 281 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 DCTN3O75935 186 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 IFNA5P01569 189 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 TNNC2P02585 160 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 SERPINA7P05543 415 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 MAGEA12P43365 314 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 POLR2GP62487 172 aaKnown RBP eCLIP1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 HIST1H4AP62805 103 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 UBE2IP63279 158 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 CAV1Q03135 178 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 PTRHD1Q6GMV3 140 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 C8orf74Q6P047 294 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 SLC36A1Q7Z2H8 476 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 RPP25LQ8N5L8 163 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 ZNF676Q8N7Q3 588 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 OR1M1Q8NGA1 313 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 OR2T4Q8NH00 348 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 ERMAPQ96PL5 475 aaPredicted RBP1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 GUCA1BQ9UMX6 200 aa1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 LSM5Q9Y4Y9 91 aaKnown RBP1.59□□□□□ -2.15
SMCHD1-205ENST00000581383 NRXN2Q9P2S2 1712 aa1.59□□□□□ -2.16
SMCHD1-205ENST00000581383 MED13Q9UHV7 2174 aa1.59□□□□□ -2.16
SMCHD1-205ENST00000581383 MYO3BQ8WXR4 1341 aa1.59□□□□□ -2.16
SMCHD1-205ENST00000581383 UBR2Q8IWV8 1755 aa1.59□□□□□ -2.16
SMCHD1-205ENST00000581383 KIF13BQ9NQT8 1826 aa1.59□□□□□ -2.16
SMCHD1-205ENST00000581383 RTL9Q8NET4 1388 aa1.59□□□□□ -2.16
SMCHD1-205ENST00000581383 MYH11P35749 1972 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 HEATR5AQ86XA9 2040 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 CIAO1O76071 339 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 SRP19P09132 144 aaKnown RBP1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 ZNF705DP0CH99 300 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 GPX2P18283 190 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 NKX2-5P52952 324 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 ITGB3BPQ13352 177 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 FAM27BQ5VT28 67 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 LPCAT4Q643R3 524 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 GLT8D1Q68CQ7 371 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 DYNAPQ8N1N2 210 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 TMEM86AQ8N2M4 240 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 KLK6Q92876 244 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 ROPN1LQ96C74 230 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 CHST6Q9GZX3 395 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 SSC5DA1L4H1 1573 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 ZNF831Q5JPB2 1677 aa1.58□□□□□ -2.16
SMCHD1-205ENST00000581383 LAMB4A4D0S4 1761 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 DLEC1Q9Y238 1755 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 FREM1Q5H8C1 2179 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 RALGAPA2Q2PPJ7 1873 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 A0A0J9YY10 115 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 A0A1B0GX78 115 aa1.57□□□□□ -2.16
SMCHD1-205ENST00000581383 GGT3PA6NGU5 568 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms