RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TMEM116Q8NCL8 245 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 OR4X1Q8NH49 305 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 THAP6Q8TBB0 222 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 ZNF502Q8TBZ5 544 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 SCARB1Q8WTV0 552 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 PINX1Q96BK5 328 aaKnown RBP8.05□□□□□ -1.12
CCDC47-203ENST00000580986 OR4C12Q96R67 309 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 SLC25A31Q9H0C2 315 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 FNDC4Q9H6D8 234 aaPredicted RBP8.05□□□□□ -1.12
CCDC47-203ENST00000580986 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
CCDC47-203ENST00000580986 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.04□□□□□ -1.12
CCDC47-203ENST00000580986 TRAV14DV4A0A0A6YYC5 116 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 MFSD2BA6NFX1 497 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 H3BP45 60 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 SCGB2A1O75556 95 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 IFNA4P05014 189 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 NPBWR1P48145 328 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 SULT1A1P50225 295 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 CAV2P51636 162 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 MFAP4P55083 255 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 TNP2Q05952 138 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 FHL3Q13643 280 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 LRRC37A5PQ49AS3 106 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 ETV3LQ6ZN32 361 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 LCNL1Q6ZST4 164 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 STX12Q86Y82 276 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 TCTE3Q8IZS6 198 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 TMEM252Q8N6L7 170 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 KLHL30-AS1Q8NEE0 82 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 OR10P1Q8NGE3 313 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 OR2T35Q8NGX2 323 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 MISP3Q96FF7 219 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 WDR89Q96FK6 387 aaPredicted RBP8.04□□□□□ -1.12
CCDC47-203ENST00000580986 BSCL2Q96G97 398 aaPredicted RBP8.04□□□□□ -1.12
CCDC47-203ENST00000580986 CCDC140Q96MF4 163 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 GNB4Q9HAV0 340 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 RANGRFQ9HD47 186 aaPredicted RBP8.04□□□□□ -1.12
CCDC47-203ENST00000580986 OR5AC2Q9NZP5 309 aa8.04□□□□□ -1.12
CCDC47-203ENST00000580986 TRAV30A0A087WSZ9 112 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 KRTAP9-6A0A140TA67 174 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 SCO2A0A1W2PP80 73 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
CCDC47-203ENST00000580986 G3V3Q6 166 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 HSPB1P04792 205 aaKnown RBP8.03□□□□□ -1.12
CCDC47-203ENST00000580986 S100A11P31949 105 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 HBG1P69891 147 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 HBG2P69892 147 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 DLK1P80370 383 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 SLC16A13Q7RTY0 426 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 OR4F17Q8NGA8 305 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 DCUN1D4Q92564 292 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 ST6GAL2Q96JF0 529 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 OR4F4Q96R69 305 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 MBD2Q9UBB5 411 aa8.03□□□□□ -1.12
CCDC47-203ENST00000580986 PEF1Q9UBV8 284 aaKnown RBP8.03□□□□□ -1.12
CCDC47-203ENST00000580986 STAB1Q9NY15 2570 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 NUDT19A8MXV4 375 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 CLN5O75503 358 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 CCNKO75909 580 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 METTL15P1P0C7V9 234 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 ZP3P21754 424 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 EWSR1Q01844 656 aaKnown RBP eCLIP8.02□□□□□ -1.13
CCDC47-203ENST00000580986 ZNF616Q08AN1 781 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 ATP6V1FQ16864 119 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 VWC2Q2TAL6 325 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 OXLD1Q5BKU9 147 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 KHDC1LQ5JSQ8 128 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 C11orf44Q8N8P7 122 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 SLC35E1Q96K37 410 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 AQP10Q96PS8 301 aa8.02□□□□□ -1.13
CCDC47-203ENST00000580986 A0A1B0GVG6 124 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 IGSF23A1L1A6 192 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 FAM24AA6NFZ4 105 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 HMSDA8MTL9 139 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 LINC01619G3V211 115 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 M0QZ24 198 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 CCL24O00175 119 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 TGOLN2O43493 480 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 GGCTO75223 188 aaKnown RBP8.01□□□□□ -1.13
CCDC47-203ENST00000580986 RPL12P30050 165 aaKnown RBP8.01□□□□□ -1.13
CCDC47-203ENST00000580986 MYCNOSP40205 109 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 GAMTQ14353 236 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 ACSM6Q6P461 480 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 ACOT7LQ6ZUV0 252 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 TMEM144Q7Z5S9 345 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 AKAP14Q86UN6 197 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 HAPLN4Q86UW8 402 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 THAP8Q8NA92 274 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 TNFSF18Q9UNG2 199 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 ANK2Q01484 3957 aa8.01□□□□□ -1.13
CCDC47-203ENST00000580986 BMPR1BO00238 502 aa8□□□□□ -1.13
CCDC47-203ENST00000580986 NUPL2O15504 423 aaKnown RBP8□□□□□ -1.13
CCDC47-203ENST00000580986 GNG7O60262 68 aa8□□□□□ -1.13
CCDC47-203ENST00000580986 IGHV3-11P01762 117 aa8□□□□□ -1.13
CCDC47-203ENST00000580986 CLEC3BP05452 202 aa8□□□□□ -1.13
CCDC47-203ENST00000580986 CTSGP08311 255 aa8□□□□□ -1.13
CCDC47-203ENST00000580986 IGLC1P0CG04 106 aa8□□□□□ -1.13
CCDC47-203ENST00000580986 GPR183P32249 361 aa8□□□□□ -1.13
CCDC47-203ENST00000580986 RND2P52198 227 aa8□□□□□ -1.13
CCDC47-203ENST00000580986 YPEL3P61236 119 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms