RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 PRR20DP86480 221 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 PRR20BP86481 221 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 PRR20AP86496 221 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 RAB31Q13636 194 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 PRR31Q5SQ13 230 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 OR10X1Q8NGY0 326 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 LINC00479Q96M42 142 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 PRNDQ9UKY0 176 aa8.52□□□□□ -1.05
TOP3A-209ENST00000580095 PRRG2O14669 202 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 PRB4P10163 310 aaPredicted RBP8.51□□□□□ -1.05
TOP3A-209ENST00000580095 SRP14P37108 136 aaKnown RBP8.51□□□□□ -1.05
TOP3A-209ENST00000580095 TFPI2P48307 235 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 PRCDQ00LT1 54 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 GFRALQ6UXV0 394 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 MRPL41Q8IXM3 137 aaKnown RBP8.51□□□□□ -1.05
TOP3A-209ENST00000580095 ZNF503Q96F45 646 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 RNASE7Q9H1E1 156 aaKnown RBP8.51□□□□□ -1.05
TOP3A-209ENST00000580095 SLC45A2Q9UMX9 530 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 SPTAN1Q13813 2472 aaKnown RBP8.51□□□□□ -1.05
TOP3A-209ENST00000580095 TANC2Q9HCD6 1990 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 LOC105371242A0A075B767 164 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 SUMO1P63165 101 aaKnown RBP8.51□□□□□ -1.05
TOP3A-209ENST00000580095 ZNF90Q03938 601 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 RUSC1-AS1Q66K80 236 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 OR10G8Q8NGN5 311 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 IGFBPL1Q8WX77 278 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 ZNF714Q96N38 554 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 COMMD5Q9GZQ3 224 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 ELOVL5Q9NYP7 299 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 SPTBN1Q01082 2364 aaKnown RBP8.51□□□□□ -1.05
TOP3A-209ENST00000580095 SPTBN4Q9H254 2564 aa8.51□□□□□ -1.05
TOP3A-209ENST00000580095 ENSAO43768 121 aaKnown RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 ADMP35318 185 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 CNN1P51911 297 aaKnown RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 RPL15P61313 204 aaKnown RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 PQLC2Q6ZP29 291 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 C1orf122Q6ZSJ8 110 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 TMEM144Q7Z5S9 345 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 MRPL36Q9P0J6 103 aaKnown RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 CTSZQ9UBR2 303 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 LINC00312Q9Y6C7 94 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 MAP1AP78559 2803 aaPredicted RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 NCOR2Q9Y618 2525 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 KIR2DL5BA0A0G2JN68 375 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 KIR2DL5BA0A0G2JPC4 375 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 GGTLC3B5MD39 225 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 H0YJW9 148 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 RNASE2P10153 161 aaKnown RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 CENPWQ5EE01 88 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 KIR2DL5AQ8N109 375 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 Q8NA96 180 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 ADTRPQ96IZ2 230 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 RNF2Q99496 336 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 ALKBH7Q9BT30 221 aaPredicted RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 PPIAL4EA0A075B759 164 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 F2Z2F3 143 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 PPIAL4DF5H284 164 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 M0QZ24 198 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 SLC25A17O43808 307 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 CA1P00915 261 aaPredicted RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 PPIAL4FP0DN26 164 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 PYYP10082 97 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 TNFRSF1AP19438 455 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 WT1-ASQ06250 92 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 HCP5Q6MZN7 132 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 WDR73Q6P4I2 378 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 MRPL52Q86TS9 123 aaKnown RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 SGK494Q96LW2 274 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 RALYQ9UKM9 306 aaKnown RBP8.5□□□□□ -1.05
TOP3A-209ENST00000580095 PPIAL4AQ9Y536 164 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 CACNA1BQ00975 2339 aa8.5□□□□□ -1.05
TOP3A-209ENST00000580095 IER3P46695 156 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 RPL8P62917 257 aaKnown RBP8.49□□□□□ -1.05
TOP3A-209ENST00000580095 KRTCAP3Q53RY4 240 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 TEX36Q5VZQ5 186 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 FLYWCH2Q96CP2 140 aaKnown RBP8.49□□□□□ -1.05
TOP3A-209ENST00000580095 FNDC4Q9H6D8 234 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-209ENST00000580095 C20orf202A1L168 122 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 TMEM178BH3BS89 294 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 TYMSP04818 313 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 MGST1P10620 155 aaKnown RBP8.49□□□□□ -1.05
TOP3A-209ENST00000580095 KIAA1644Q3SXP7 199 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 IGF2-ASQ6U949 168 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 PRSS57Q6UWY2 283 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 OR8I2Q8N0Y5 310 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 NPIPB3Q92617 1050 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 EAF1Q96JC9 268 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-209ENST00000580095 VPS25Q9BRG1 176 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 RAB9BQ9NP90 201 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 DYNLRB1Q9NP97 96 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 TMEM106BQ9NUM4 274 aa8.49□□□□□ -1.05
TOP3A-209ENST00000580095 TRAV34A0A0B4J273 112 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 HELTA6NFD8 242 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 GOSR1O95249 250 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 APOA2P02652 100 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 CNTFRP26992 372 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 TMEM249Q2WGJ8 235 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 ZNF833PQ6ZTB9 187 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 ZNF430Q9H8G1 570 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms