RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 IL34Q6ZMJ4 242 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 HSD17B13Q7Z5P4 300 aaPredicted RBP2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 ZNF695Q8IW36 515 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 FAM223AQ8IWN6 122 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 C12orf45Q8N5I9 185 aaPredicted RBP2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 ZBTB8BQ8NAP8 495 aaPredicted RBP2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 NECAP1Q8NC96 275 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 KLHL30-AS1Q8NEE0 82 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 OR11H7Q8NGC8 314 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 OR4X2Q8NGF9 303 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 OR1P1Q8NH06 330 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 ENKURQ8TC29 256 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 MS4A10Q96PG2 267 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 DUX3Q96PT4 197 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 OR4C12Q96R67 309 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 GON7Q9BXV9 100 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 COMMD5Q9GZQ3 224 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 RBKSQ9H477 322 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 SLA2Q9H6Q3 261 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 FKBP11Q9NYL4 201 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 KCNIP3Q9Y2W7 256 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 ALG5Q9Y673 324 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 TENM3Q9P273 2699 aa2.89□□□□□ -1.95
SMARCE1-215ENST00000578995 IGKV1D-37A0A075B6S9 117 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 IGKV1OR2-108A0A075B7D4 117 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 TRAV14DV4A0A0A6YYC5 116 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 A0A1W2PRX2 142 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 K7EPK0 472 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 CCL24O00175 119 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 SNAPC5O75971 98 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 OR2J3O76001 311 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 ACTL6BO94805 426 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 ATG12O94817 140 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 SIX6O95475 246 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 IGHV3-11P01762 117 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 CTSGP08311 255 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 LYL1P12980 280 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 MYCNOSP40205 109 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 TPPP2P59282 170 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 DEFA1P59665 94 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 DEFA3P59666 94 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 POLR2GP62487 172 aaKnown RBP eCLIP2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 ARL16Q0P5N6 197 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 EXOSC2Q13868 293 aaKnown RBP2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 KLF5Q13887 457 aaPredicted RBP2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 C15orf32Q32M92 178 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 NSUN5P1Q3KNT7 163 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 KPRPQ5T749 579 aaPredicted RBP2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 PLET1Q6UQ28 207 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 TMEM14EPQ6UXP3 125 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 SLC24A4Q8NFF2 622 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 OR4A16Q8NH70 328 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 COQ8AQ8NI60 647 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 VN1R17PQ8TDU5 208 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 DTD1Q8TEA8 209 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 ABHD5Q8WTS1 349 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 CHAC2Q8WUX2 184 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 RRNAD1Q96FB5 475 aaKnown RBP2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 USMG5Q96IX5 58 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 ATP6V0BQ99437 205 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 PHB2Q99623 299 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 CHRDL1Q9BU40 450 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 RNF126Q9BV68 326 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 MAGT1Q9H0U3 335 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 PLEKHA3Q9HB20 300 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 FBXL7Q9UJT9 491 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 S4R3C0 116 aa2.88□□□□□ -1.95
SMARCE1-215ENST00000578995 IGSF23A1L1A6 192 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 TMEM213A2RRL7 107 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 A8MWP6 167 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 PPP5D1E7EU14 171 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 M0QZ24 198 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 SYNGR2O43760 224 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 SCAF4O95104 1147 aaKnown RBP2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 MT-CO2P00403 227 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 IFNA17P01571 189 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 IGKV1-17P01599 117 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 IGHV3-48P01763 117 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 IGHV3-23P01764 117 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 HSPB1P04792 205 aaKnown RBP2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 IGLC1P0CG04 106 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 IAPPP10997 89 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 HIST1H1BP16401 226 aaKnown RBP2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 NPY1RP25929 384 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 HOXD3P31249 432 aaPredicted RBP2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 HTR2BP41595 481 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 NKX2-1P43699 371 aaPredicted RBP2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 TAS2R30P59541 319 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 CD69Q07108 199 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 ZNF616Q08AN1 781 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 EGFEM1PQ0D2K5 195 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 RAB32Q13637 225 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 FCN2Q15485 313 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 RNF151Q2KHN1 245 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 RGS21Q2M5E4 152 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 IAH1Q2TAA2 248 aaPredicted RBP2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 VWC2Q2TAL6 325 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 BEAN1Q3B7T3 259 aa2.87□□□□□ -1.95
SMARCE1-215ENST00000578995 Q5BKY6 102 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms