RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 WDR89Q96FK6 387 aaPredicted RBP4.96□□□□□ -1.62
TRAF4-213ENST00000578917 NARS2Q96I59 477 aaKnown RBP4.96□□□□□ -1.62
TRAF4-213ENST00000578917 NEURL2Q9BR09 285 aa4.96□□□□□ -1.62
TRAF4-213ENST00000578917 GINS3Q9BRX5 216 aa4.96□□□□□ -1.62
TRAF4-213ENST00000578917 MLXQ9UH92 298 aa4.96□□□□□ -1.62
TRAF4-213ENST00000578917 U3KQK5 164 aa4.96□□□□□ -1.62
TRAF4-213ENST00000578917 IGHV3OR16-13A0A075B7E8 117 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 TRAV30A0A087WSZ9 112 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 IGHV3-49A0A0A0MS15 119 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 IGHV3-74A0A0B4J1X5 117 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 TRAV25A0A0B4J276 109 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 DUXBA0A1W2PPF3 345 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 ZNF785A8K8V0 405 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 OR11H12B2RN74 326 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 INS-IGF2F8WCM5 200 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 K7EMT4 169 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 MED6O75586 246 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 NDUFB6O95139 128 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 SFT2D2O95562 160 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 TMEM50AO95807 157 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 RNASE2P10153 161 aaKnown RBP4.95□□□□□ -1.62
TRAF4-213ENST00000578917 SLC25A4P12235 298 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 IL7P13232 177 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 EDN2P20800 178 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 NPPCP23582 126 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 NPY1RP25929 384 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 ADMP35318 185 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 UBE2MP61081 183 aaKnown RBP4.95□□□□□ -1.62
TRAF4-213ENST00000578917 PAFAH1B2P68402 229 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 RPP30P78346 268 aaKnown RBP4.95□□□□□ -1.62
TRAF4-213ENST00000578917 PPP1R1AQ13522 171 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 MLANAQ16655 118 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 CNPY1Q3B7I2 92 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 NMSQ5H8A3 153 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 C11orf87Q6NUJ2 197 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 SBSPONQ8IVN8 264 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 TMEM61Q8N0U2 210 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 DEFB125Q8N687 156 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 TMEM116Q8NCL8 245 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 SLC24A4Q8NFF2 622 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 COQ8AQ8NI60 647 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 RNASEH2CQ8TDP1 164 aaKnown RBP4.95□□□□□ -1.62
TRAF4-213ENST00000578917 DTD1Q8TEA8 209 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 Q8WTZ3 238 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 S100ZQ8WXG8 99 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 TMEM190Q8WZ59 177 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 ACY3Q96HD9 319 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 C7orf50Q9BRJ6 194 aaKnown RBP4.95□□□□□ -1.62
TRAF4-213ENST00000578917 RHPN1-AS1Q9BWJ2 59 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 ZNF436Q9C0F3 470 aaPredicted RBP4.95□□□□□ -1.62
TRAF4-213ENST00000578917 RBKSQ9H477 322 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 SMPXQ9UHP9 88 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 FLVCR2Q9UPI3 526 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 TMED3Q9Y3Q3 217 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 PUS1Q9Y606 427 aaKnown RBP eCLIP4.95□□□□□ -1.62
TRAF4-213ENST00000578917 U3KQ87 197 aa4.95□□□□□ -1.62
TRAF4-213ENST00000578917 PRKDCP78527 4128 aaKnown RBP4.95□□□□□ -1.62
TRAF4-213ENST00000578917 IGKV3-7A0A075B6H7 116 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 C9orf170A2RU37 121 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 OR4C46A6NHA9 309 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 DNASE2O00115 360 aaPredicted RBP4.94□□□□□ -1.62
TRAF4-213ENST00000578917 WRBO00258 174 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 CLN5O75503 358 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 CD7P09564 240 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 OR4E1P0C645 316 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 C8orf88P0DMB2 117 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 ANXA7P20073 488 aaKnown RBP4.94□□□□□ -1.62
TRAF4-213ENST00000578917 OR10J1P30954 320 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 FCGR2BP31994 310 aaPredicted RBP4.94□□□□□ -1.62
TRAF4-213ENST00000578917 TFPI2P48307 235 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 RND2P52198 227 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 ATP5IP56385 69 aaPredicted RBP4.94□□□□□ -1.62
TRAF4-213ENST00000578917 RAB11AP62491 216 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 ZNF846Q147U1 533 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 AARDQ4LEZ3 155 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 C2orf83Q53S99 150 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 GGNBP1Q5YKI7 109 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 MZT2BQ6NZ67 158 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 TOMM20LQ6UXN7 152 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 ZNF600Q6ZNG1 722 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 GBGT1Q8N5D6 347 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 OR4X1Q8NH49 305 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 CIB3Q96Q77 187 aaPredicted RBP4.94□□□□□ -1.62
TRAF4-213ENST00000578917 METTL26Q96S19 204 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 MAGT1Q9H0U3 335 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 TMEM231Q9H6L2 316 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 SRD5A3Q9H8P0 318 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 GSKIPQ9P0R6 139 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 HSPB7Q9UBY9 170 aa4.94□□□□□ -1.62
TRAF4-213ENST00000578917 TRAV6A0A075B6T7 132 aa4.93□□□□□ -1.62
TRAF4-213ENST00000578917 IGHV3-66A0A0C4DH42 116 aa4.93□□□□□ -1.62
TRAF4-213ENST00000578917 IGHV7-4-1A0A0J9YVY3 117 aa4.93□□□□□ -1.62
TRAF4-213ENST00000578917 FAM240BA0A1B0GVZ2 78 aa4.93□□□□□ -1.62
TRAF4-213ENST00000578917 A0A1W2PS18 150 aa4.93□□□□□ -1.62
TRAF4-213ENST00000578917 ZFP92A6NM28 416 aa4.93□□□□□ -1.62
TRAF4-213ENST00000578917 FAM25EA8MYX2 175 aa4.93□□□□□ -1.62
TRAF4-213ENST00000578917 F8W735 103 aaPredicted RBP4.93□□□□□ -1.62
TRAF4-213ENST00000578917 LYRM1O43325 122 aa4.93□□□□□ -1.62
TRAF4-213ENST00000578917 CD5P06127 495 aa4.93□□□□□ -1.62
TRAF4-213ENST00000578917 FABP1P07148 127 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms