RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 OXA1LQ15070 435 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 TNXAQ16473 311 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 NMSQ5H8A3 153 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 Q6ZRM9 215 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 H2BFWTQ7Z2G1 175 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 FAM223AQ8IWN6 122 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 MMD2Q8IY49 270 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 STPG3Q8N7X2 389 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 LRTM2Q8N967 370 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 OR5T1Q8NG75 326 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 OR4A5Q8NH83 315 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 RNASE11Q8TAA1 199 aaKnown RBP5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 VSTM2AQ8TAG5 236 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 ZNF431Q8TF32 576 aaPredicted RBP5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 SRSF12Q8WXF0 261 aaKnown RBP5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 GPR146Q96CH1 333 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 AIFM2Q9BRQ8 373 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 APLNQ9ULZ1 77 aa5.3□□□□□ -1.56
CDK5RAP3-209ENST00000578663 A0A0B4J2A0 478 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 HMX3A6NHT5 357 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 C15orf61A6NNL5 157 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 MPTX1A8MV57 137 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 A8MWP6 167 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 TEX22C9J3V5 150 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 C11orf94C9JXX5 98 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 CCSO14618 274 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 CREBL2O60519 120 aaPredicted RBP5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 SNAPC5O75971 98 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 ACTL6BO94805 426 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 ATG12O94817 140 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 HOXB5P09067 269 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 APELAP0DMC3 54 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 RPL27AP46776 148 aaKnown RBP5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 EXOSC2Q13868 293 aaKnown RBP5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 TM4SF20Q53R12 229 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 SPINK9Q5DT21 86 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 GGNBP1Q5YKI7 109 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 CADM3Q8N126 398 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 COQ8AQ8NI60 647 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 C11orf45Q8TAV5 145 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 MITD1Q8WV92 249 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 LSM10Q969L4 123 aaKnown RBP5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 RRNAD1Q96FB5 475 aaKnown RBP5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 QTRT1Q9BXR0 403 aaKnown RBP5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 TMEM14BQ9NUH8 114 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 CACNG5Q9UF02 275 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 SHPKQ9UHJ6 478 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 OR51B2Q9Y5P1 312 aa5.29□□□□□ -1.56
CDK5RAP3-209ENST00000578663 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 TRBV9A0A0B4J1U6 114 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 TEX50A0A1B0GTY4 177 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 DUXBA0A1W2PPF3 345 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 TMEM213A2RRL7 107 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 C7orf66A4D0T2 115 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 ST8SIA3O43173 380 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 PRAF2O60831 178 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 GGCTO75223 188 aaKnown RBP5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 RBMXL2O75526 392 aaKnown RBP5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 NXPH3O95157 252 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 DHFRP00374 187 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 AREGP15514 252 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 CTRB1P17538 263 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 CBLN1P23435 193 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 MAS1LP35410 378 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 NANOS2P60321 138 aaKnown RBP5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 RHOGP84095 191 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 DEFA5Q01523 94 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 CTRB2Q6GPI1 263 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 C19orf35Q6ZS72 473 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 FAM219AQ8IW50 185 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 C12orf45Q8N5I9 185 aaPredicted RBP5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 UXS1Q8NBZ7 420 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 OR10W1Q8NGF6 305 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 OR1L6Q8NGR2 347 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 OR4A16Q8NH70 328 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 MARC2Q969Z3 335 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 FYTTD1Q96QD9 318 aaKnown RBP5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 PHB2Q99623 299 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 HINT2Q9BX68 163 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 COMMD5Q9GZQ3 224 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 GPN1Q9HCN4 374 aaPredicted RBP5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 COA4Q9NYJ1 87 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 FBXL17Q9UF56 701 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 PRNDQ9UKY0 176 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 ALG5Q9Y673 324 aa5.28□□□□□ -1.56
CDK5RAP3-209ENST00000578663 LRP2P98164 4655 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 A0A1B0GU03 582 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 IGLC7A0M8Q6 106 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 SNRPGP15A8MWD9 76 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 PITX3O75364 302 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 REG1AP05451 166 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 FGF2P09038 288 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 SULT1A3P0DMM9 295 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 SULT1A4P0DMN0 295 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 MFAP2P55001 183 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 HSPE1P61604 102 aaKnown RBP5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 SMCO1Q147U7 214 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 LGALS9BQ3B8N2 356 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 AARDQ4LEZ3 155 aa5.27□□□□□ -1.57
CDK5RAP3-209ENST00000578663 GPHB5Q86YW7 130 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms