RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PERPQ96FX8 193 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TRGV9Q99603 122 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 RNF5Q99942 180 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PAXXQ9BUH6 204 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 RAB1BQ9H0U4 201 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 OSTCQ9NRP0 149 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 ZNF355PQ9NSJ1 428 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 MRPL36Q9P0J6 103 aaKnown RBP7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 SIGLEC9Q9Y336 463 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 INSIG2Q9Y5U4 225 aa7.5□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CUL9Q8IWT3 2517 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 LY6LH3BQJ8 138 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CORTO00230 105 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 GCGP01275 180 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 LIPFP07098 398 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CNTFRP26992 372 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 MFAP2P55001 183 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 LGALS4P56470 323 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TAS2R60P59551 318 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 SUMO1P63165 101 aaKnown RBP7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 RPEL1Q2QD12 228 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 MORN5Q5VZ52 161 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TIMD4Q96H15 378 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 IGF2BP2-AS1Q96M15 143 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TNFRSF19Q9NS68 423 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CBLN4Q9NTU7 201 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 V9GYV3 84 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TTC28Q96AY4 2481 aa7.49□□□□□ -1.21
CDK5RAP3-208ENST00000578525 ZGRF1Q86YA3 2104 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TEX22C9J3V5 150 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 C22orf46C9J442 243 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 SLC17A3O00476 420 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 HIST1H1BP16401 226 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 DLX1P56177 255 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 ERVFC1-1P60608 527 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 NHLH1Q02575 133 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 OR5I1Q13606 314 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 JOSD1Q15040 202 aaPredicted RBP7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TPTE2P1Q5T6R2 138 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 C11orf71Q6IPW1 123 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 HCP5Q6MZN7 132 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 ZNF329Q86UD4 541 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PPP1R27Q86WC6 154 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 STXBP6Q8NFX7 210 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 OR1L6Q8NGR2 347 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 OR5R1Q8NH85 324 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 NEU4Q8WWR8 484 aaPredicted RBP7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TMEM18Q96B42 140 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 SRSF8Q9BRL6 282 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 ONECUT1Q9UBC0 465 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 F11RQ9Y624 299 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 DMDP11532 3685 aa7.48□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CNOT1A5YKK6 2376 aaKnown RBP7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TRBV9A0A0B4J1U6 114 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 M0R1W7 72 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PEX7O00628 323 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 ISLRO14498 428 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 MOSP00540 346 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 IGLV2-8P01709 118 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 IGHV3-48P01763 117 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PYYP10082 97 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 ADMP35318 185 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 RPL19P84098 196 aaKnown RBP7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 PRB3Q04118 309 aaPredicted RBP7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CDSNQ15517 529 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 COX19Q49B96 90 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 TMEM116Q8NCL8 245 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 FXYD5Q96DB9 178 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 FBXL15Q9H469 300 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 CDC42EP3Q9UKI2 254 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 WDFY4Q6ZS81 3184 aa7.47□□□□□ -1.21
CDK5RAP3-208ENST00000578525 HYPMO75409 117 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MGST1P10620 155 aaKnown RBP7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PLP1P60201 277 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PLGLAQ15195 96 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 C19orf35Q6ZS72 473 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 LINC00305Q7Z4B0 112 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 GBGT1Q8N5D6 347 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 OR11H6Q8NGC7 330 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 OR1B1Q8NGR6 318 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 SRSF12Q8WXF0 261 aaKnown RBP7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MRPL18Q9H0U6 180 aaKnown RBP7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 DPM3Q9P2X0 92 aa7.46□□□□□ -1.22
CDK5RAP3-208ENST00000578525 PLCE1Q9P212 2302 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ARFGEF3Q5TH69 2177 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 LOC105371242A0A075B767 164 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ODF3BA8MYP8 253 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 TIMM23O14925 209 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MT-ND6P03923 174 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 ORM2P19652 201 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 CBLN1P23435 193 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 HTR1DP28221 377 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 CEACAM3P40198 252 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 MYCNOSP40205 109 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 RUSC1-AS1Q66K80 236 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 WDR73Q6P4I2 378 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 FAM231DQ6ZW35 169 aa7.45□□□□□ -1.22
CDK5RAP3-208ENST00000578525 OR8I2Q8N0Y5 310 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms