RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 Q6ZN92 141 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ACP7Q6ZNF0 438 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF550Q7Z398 422 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 LHFPL1Q86WI0 220 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 SGPP2Q8IWX5 399 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ATOH7Q8N100 152 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 SLC25A45Q8N413 288 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 COX18Q8N8Q8 333 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 Q8N976 141 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 OR52R1Q8NGF1 315 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 OR4B1Q8NGF8 309 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 OR5D14Q8NGL3 314 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 OR4C16Q8NGL9 310 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 OR10D3Q8NH80 312 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 OR10G6Q8NH81 332 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 PPTC7Q8NI37 304 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 OR51E1Q8TCB6 317 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 CT55Q8WUE5 264 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 NEURL3Q96EH8 262 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 DPH3Q96FX2 82 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ACY3Q96HD9 319 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 FMC1Q96HJ9 113 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 GNB1LQ9BYB4 327 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 POLR2J2Q9GZM3 115 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 CHST6Q9GZX3 395 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 TCEAL2Q9H3H9 227 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF442Q9H7R0 627 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 REEP1Q9H902 201 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 TPRKBQ9Y3C4 175 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 MYH6P13533 1939 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 IQGAP2Q13576 1575 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 CDC42BPGQ6DT37 1551 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 SYCP2Q9BX26 1530 aa2.22□□□□□ -2.05
SMCHD1-202ENST00000577300 ZSWIM8A7E2V4 1837 aa2.21□□□□□ -2.05
SMCHD1-202ENST00000577300 TOP2BQ02880 1626 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 ATG2AQ2TAZ0 1938 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 A0A087WWC5 75 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TRAV5A0A0B4J249 113 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TRAV26-2A0A0B4J265 109 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 FAM240AA0A1B0GVK7 77 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 A6NDN8 102 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 GEMIN2O14893 280 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 SYNJ1O43426 1573 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 ABCA8O94911 1581 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 NDUFC2O95298 119 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 CYB5AP00167 134 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TNFP01375 233 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 P01737 135 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 OR5AL1P0C617 328 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 IFITM1P13164 125 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 CTLA4P16410 223 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 COX7A1P24310 79 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 CRYBB3P26998 211 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 ARL2P36404 184 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 OPRK1P41145 380 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 VDAC2P45880 294 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 FABP6P51161 128 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 NDUFA8P51970 172 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TAS2R46P59540 309 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 SLC25A11Q02978 314 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 LOXL1Q08397 574 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 Q0VG73 95 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 FOXF1Q12946 379 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 CLEC12BQ2HXU8 276 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 PYDC2Q56P42 97 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TCEAL5Q5H9L2 206 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TTC32Q5I0X7 151 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 BVES-AS1Q5T3Y7 98 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 SHISA6Q6ZSJ9 500 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 DAZ4Q86SG3 579 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 LRP11Q86VZ4 500 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 C1orf174Q8IYL3 243 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 ZIC4Q8N9L1 334 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 OR1J4Q8NGS1 313 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 OR8S1Q8NH09 359 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TWIST2Q8WVJ9 160 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 RTN4IP1Q8WWV3 396 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 CDK5RAP2Q96SN8 1893 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 RARRES2Q99969 163 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 SNRNP25Q9BV90 132 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 PLA2G12AQ9BZM1 189 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM9BQ9NQ34 198 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 DAZ1Q9NQZ3 744 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM106BQ9NUM4 274 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 TXNL4BQ9NX01 149 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 C21orf62Q9NYP8 219 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 CCDC167Q9P0B6 97 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 ANKRD26Q9UPS8 1709 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 KLF13Q9Y2Y9 288 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 XIRP1Q702N8 1843 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 WIZO95785 1651 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 EFCAB6Q5THR3 1501 aa2.21□□□□□ -2.06
SMCHD1-202ENST00000577300 ATP7BP35670 1465 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF106Q9H2Y7 1883 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 SIPA1L1O43166 1804 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 KIF13BQ9NQT8 1826 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 IGLV3-22A0A075B6J6 115 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 A0A0U1RQV1 116 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 LOC107986453A0A1B0GWG9 222 aa2.2□□□□□ -2.06
SMCHD1-202ENST00000577300 OR4C45A6NMZ5 311 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms