RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TMEM8BA6NDV4 472 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 PGPEP1LA6NFU8 196 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 ODF3BA8MYP8 253 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 FCN1O00602 326 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 EFNA4P52798 201 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 THAP8Q8NA92 274 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 OR1P1Q8NH06 330 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 ANAPC16Q96DE5 110 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 UHRF2Q96PU4 802 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 SLC25A33Q9BSK2 321 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 MRPL32Q9BYC8 188 aaKnown RBP11.23□□□□□ -0.61
VPS33B-208ENST00000574755 DNAJC4Q9NNZ3 241 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 TRBV24-1A0A075B6N3 115 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 IGKV1D-37A0A075B6S9 117 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 PSMB11A5LHX3 300 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 TEX22C9J3V5 150 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 OR10J4P0C629 311 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 C8orf88P0DMB2 117 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 S100PP25815 95 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
VPS33B-208ENST00000574755 GALR1P47211 349 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 VMO1Q7Z5L0 202 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 C22orf15Q8WYQ4 148 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 ZNF503Q96F45 646 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 PFDN5Q99471 154 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 RNF2Q99496 336 aa11.23□□□□□ -0.61
VPS33B-208ENST00000574755 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 CORTO00230 105 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 CNIH1O95406 144 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 CD24P25063 80 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 SELENOTP62341 195 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 FABP9Q0Z7S8 132 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 IGFBPL1Q8WX77 278 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 CFHR4Q92496 578 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 F11RQ9Y624 299 aaKnown RBP11.22□□□□□ -0.61
VPS33B-208ENST00000574755 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
VPS33B-208ENST00000574755 UBE2CO00762 179 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 TRGC2P03986 189 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 BPIFB3P59826 476 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 LCN2P80188 198 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 HES1Q14469 280 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 SSX2Q16385 188 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 C10orf113Q5VZT2 155 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 RUSC1-AS1Q66K80 236 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 C1orf122Q6ZSJ8 110 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 OR1L4Q8NGR5 311 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 OR4X1Q8NH49 305 aa11.21□□□□□ -0.61
VPS33B-208ENST00000574755 IGHV3-21A0A0B4J1V1 117 aa11.21□□□□□ -0.62
VPS33B-208ENST00000574755 NBR2O15453 112 aa11.21□□□□□ -0.62
VPS33B-208ENST00000574755 MOSP00540 346 aa11.21□□□□□ -0.62
VPS33B-208ENST00000574755 IGHV2-5P01817 119 aa11.21□□□□□ -0.62
VPS33B-208ENST00000574755 CRYGCP07315 174 aa11.21□□□□□ -0.62
VPS33B-208ENST00000574755 PFN1P07737 140 aaKnown RBP11.21□□□□□ -0.62
VPS33B-208ENST00000574755 LINC00518Q8N0U6 118 aa11.21□□□□□ -0.62
VPS33B-208ENST00000574755 KIR3DL3Q8N743 410 aa11.21□□□□□ -0.62
VPS33B-208ENST00000574755 TNFRSF19Q9NS68 423 aa11.21□□□□□ -0.62
VPS33B-208ENST00000574755 CFAP46Q8IYW2 2715 aa11.21□□□□□ -0.62
VPS33B-208ENST00000574755 TRAV5A0A0B4J249 113 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 AP4M1O00189 453 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 LGALS4P56470 323 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 OR5AU1Q8NGC0 362 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 ELOVL1Q9BW60 279 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 SLC25A2Q9BXI2 301 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 WNK2Q9Y3S1 2297 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 UBE2L3P68036 154 aaKnown RBP11.2□□□□□ -0.62
VPS33B-208ENST00000574755 TMEM116Q8NCL8 245 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 C11orf52Q96A22 123 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 ZNF355PQ9NSJ1 428 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 AKAP6Q13023 2319 aa11.2□□□□□ -0.62
VPS33B-208ENST00000574755 HNF1AP20823 631 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 CLEC12BQ2HXU8 276 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 PATE2Q6UY27 113 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 EAF1Q96JC9 268 aaPredicted RBP11.19□□□□□ -0.62
VPS33B-208ENST00000574755 FAM167A-AS1Q96KT0 104 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 A0A1W2PPQ1 181 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 TGOLN2O43493 480 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 CD99P14209 185 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 HOXB4P17483 251 aaPredicted RBP11.19□□□□□ -0.62
VPS33B-208ENST00000574755 CCDC144NLQ6NUI1 221 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 SFRP2Q96HF1 295 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 DMRT1Q9Y5R6 373 aa11.19□□□□□ -0.62
VPS33B-208ENST00000574755 IGSF10Q6WRI0 2623 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 MDFIC2A0A1B0GVS7 189 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 NDUFA3O95167 84 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 ORM2P19652 201 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 CRYBB3P26998 211 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 NPBQ8NG41 125 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 OCC1Q8TAD7 63 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 TRGV9Q99603 122 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 SVEP1Q4LDE5 3571 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 ELOA3CA0A087WX78 387 aaPredicted RBP11.18□□□□□ -0.62
VPS33B-208ENST00000574755 A0A1W2PRE2 83 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 GGTLC3B5MD39 225 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 HIST1H2BKO60814 126 aa11.18□□□□□ -0.62
VPS33B-208ENST00000574755 HIST1H2BJP06899 126 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms