RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 SPCS3P61009 180 aa19.36■□□□□ 0.69
NPLOC4-215ENST00000574095 MCUBQ9NWR8 336 aa19.36■□□□□ 0.69
NPLOC4-215ENST00000574095 MRPL36Q9P0J6 103 aaKnown RBP19.36■□□□□ 0.69
NPLOC4-215ENST00000574095 SCP2D1Q9UJQ7 156 aa19.36■□□□□ 0.69
NPLOC4-215ENST00000574095 TENM2Q9NT68 2774 aa19.35■□□□□ 0.69
NPLOC4-215ENST00000574095 CORTO00230 105 aa19.35■□□□□ 0.69
NPLOC4-215ENST00000574095 TMEM230Q96A57 120 aa19.35■□□□□ 0.69
NPLOC4-215ENST00000574095 FNDC4Q9H6D8 234 aaPredicted RBP19.35■□□□□ 0.69
NPLOC4-215ENST00000574095 PRR13Q9NZ81 148 aa19.35■□□□□ 0.69
NPLOC4-215ENST00000574095 CACNG5Q9UF02 275 aa19.35■□□□□ 0.69
NPLOC4-215ENST00000574095 IGKV3-7A0A075B6H7 116 aa19.34■□□□□ 0.69
NPLOC4-215ENST00000574095 OPRK1P41145 380 aa19.34■□□□□ 0.69
NPLOC4-215ENST00000574095 AARDQ4LEZ3 155 aa19.34■□□□□ 0.69
NPLOC4-215ENST00000574095 ZNF600Q6ZNG1 722 aa19.34■□□□□ 0.69
NPLOC4-215ENST00000574095 OR52E5Q8NH55 327 aa19.34■□□□□ 0.69
NPLOC4-215ENST00000574095 OVOL2Q9BRP0 275 aa19.34■□□□□ 0.69
NPLOC4-215ENST00000574095 PUS1Q9Y606 427 aaKnown RBP eCLIP19.34■□□□□ 0.69
NPLOC4-215ENST00000574095 TMEM56-RWDD3S4R434 201 aa19.34■□□□□ 0.69
NPLOC4-215ENST00000574095 TFPI2P48307 235 aa19.33■□□□□ 0.68
NPLOC4-215ENST00000574095 BSXQ3C1V8 233 aa19.33■□□□□ 0.68
NPLOC4-215ENST00000574095 GINS3Q9BRX5 216 aa19.33■□□□□ 0.68
NPLOC4-215ENST00000574095 ZFAND3Q9H8U3 227 aa19.33■□□□□ 0.68
NPLOC4-215ENST00000574095 HEYLQ9NQ87 328 aaPredicted RBP19.33■□□□□ 0.68
NPLOC4-215ENST00000574095 KCNIP3Q9Y2W7 256 aa19.33■□□□□ 0.68
NPLOC4-215ENST00000574095 A0A1B0GU03 582 aa19.32■□□□□ 0.68
NPLOC4-215ENST00000574095 CCDC160A6NGH7 325 aa19.32■□□□□ 0.68
NPLOC4-215ENST00000574095 APOHP02749 345 aaPredicted RBP19.32■□□□□ 0.68
NPLOC4-215ENST00000574095 TMEM187Q14656 261 aa19.32■□□□□ 0.68
NPLOC4-215ENST00000574095 FAM90A2PQ658T7 463 aa19.32■□□□□ 0.68
NPLOC4-215ENST00000574095 SCGB3A2Q96PL1 93 aa19.32■□□□□ 0.68
NPLOC4-215ENST00000574095 CLN5O75503 358 aa19.31■□□□□ 0.68
NPLOC4-215ENST00000574095 NXPH3O95157 252 aa19.31■□□□□ 0.68
NPLOC4-215ENST00000574095 AKR1C4P17516 323 aa19.31■□□□□ 0.68
NPLOC4-215ENST00000574095 APRG1Q8IVJ8 170 aa19.31■□□□□ 0.68
NPLOC4-215ENST00000574095 GBGT1Q8N5D6 347 aa19.31■□□□□ 0.68
NPLOC4-215ENST00000574095 ST8SIA2Q92186 375 aa19.31■□□□□ 0.68
NPLOC4-215ENST00000574095 GALNT14Q96FL9 552 aa19.31■□□□□ 0.68
NPLOC4-215ENST00000574095 IGHV3-66A0A0C4DH42 116 aa19.3■□□□□ 0.68
NPLOC4-215ENST00000574095 CEBPZOSA8MTT3 80 aa19.3■□□□□ 0.68
NPLOC4-215ENST00000574095 RPL35AP18077 110 aaKnown RBP19.3■□□□□ 0.68
NPLOC4-215ENST00000574095 HTR2BP41595 481 aa19.3■□□□□ 0.68
NPLOC4-215ENST00000574095 APOC4P55056 127 aa19.3■□□□□ 0.68
NPLOC4-215ENST00000574095 TCF24Q7RTU0 167 aa19.3■□□□□ 0.68
NPLOC4-215ENST00000574095 LILRB2Q8N423 598 aa19.3■□□□□ 0.68
NPLOC4-215ENST00000574095 OR4X1Q8NH49 305 aa19.3■□□□□ 0.68
NPLOC4-215ENST00000574095 RYR2Q92736 4967 aa19.3■□□□□ 0.68
NPLOC4-215ENST00000574095 ZNF124Q15973 351 aa19.29■□□□□ 0.68
NPLOC4-215ENST00000574095 PYDC2Q56P42 97 aa19.29■□□□□ 0.68
NPLOC4-215ENST00000574095 IL22RA2Q969J5 263 aa19.29■□□□□ 0.68
NPLOC4-215ENST00000574095 VSIRQ9H7M9 311 aa19.29■□□□□ 0.68
NPLOC4-215ENST00000574095 LCE6AA0A183 80 aa19.28■□□□□ 0.68
NPLOC4-215ENST00000574095 SUPT4H1P63272 117 aaKnown RBP19.28■□□□□ 0.68
NPLOC4-215ENST00000574095 IL17DQ8TAD2 202 aa19.28■□□□□ 0.68
NPLOC4-215ENST00000574095 LYSTQ99698 3801 aa19.27■□□□□ 0.68
NPLOC4-215ENST00000574095 SULT1A3P0DMM9 295 aa19.27■□□□□ 0.68
NPLOC4-215ENST00000574095 SULT1A4P0DMN0 295 aa19.27■□□□□ 0.68
NPLOC4-215ENST00000574095 KLF9Q13886 244 aaPredicted RBP19.27■□□□□ 0.68
NPLOC4-215ENST00000574095 TIGITQ495A1 244 aa19.27■□□□□ 0.68
NPLOC4-215ENST00000574095 C2orf83Q53S99 150 aa19.27■□□□□ 0.68
NPLOC4-215ENST00000574095 LYZL2Q7Z4W2 148 aa19.27■□□□□ 0.68
NPLOC4-215ENST00000574095 WFDC3Q8IUB2 231 aa19.27■□□□□ 0.68
NPLOC4-215ENST00000574095 V9GYH0 126 aa19.27■□□□□ 0.68
NPLOC4-215ENST00000574095 DFFBO76075 338 aa19.26■□□□□ 0.67
NPLOC4-215ENST00000574095 BMI1P35226 326 aa19.26■□□□□ 0.67
NPLOC4-215ENST00000574095 PAFAH1B2P68402 229 aa19.26■□□□□ 0.67
NPLOC4-215ENST00000574095 DEFB135Q30KP9 77 aa19.26■□□□□ 0.67
NPLOC4-215ENST00000574095 Q6ZWC4 215 aa19.26■□□□□ 0.67
NPLOC4-215ENST00000574095 SLC24A4Q8NFF2 622 aa19.26■□□□□ 0.67
NPLOC4-215ENST00000574095 TMEM170AQ8WVE7 144 aa19.26■□□□□ 0.67
NPLOC4-215ENST00000574095 TRIM63Q969Q1 353 aa19.26■□□□□ 0.67
NPLOC4-215ENST00000574095 RPS10-NUDT3A0A1W2PQS6 291 aa19.25■□□□□ 0.67
NPLOC4-215ENST00000574095 SPRY2O43597 315 aa19.25■□□□□ 0.67
NPLOC4-215ENST00000574095 NPPCP23582 126 aa19.25■□□□□ 0.67
NPLOC4-215ENST00000574095 FAUP35544 74 aaKnown RBP19.25■□□□□ 0.67
NPLOC4-215ENST00000574095 CMC4P56277 68 aaPredicted RBP19.25■□□□□ 0.67
NPLOC4-215ENST00000574095 TOMM5Q8N4H5 51 aa19.25■□□□□ 0.67
NPLOC4-215ENST00000574095 STPG3Q8N7X2 389 aa19.25■□□□□ 0.67
NPLOC4-215ENST00000574095 MAP6D1Q9H9H5 199 aa19.25■□□□□ 0.67
NPLOC4-215ENST00000574095 A0A0B4J2A0 478 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 KIR2DL5BA0A0G2JN68 375 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 KIR2DL5BA0A0G2JPC4 375 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 UBE2CO00762 179 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 IGKV1-17P01599 117 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 CD5P06127 495 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 S100A5P33763 92 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 RPL11P62913 178 aaKnown RBP19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 ZNF79Q15937 498 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 NMSQ5H8A3 153 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 PRSS54Q6PEW0 395 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 KIR2DL5AQ8N109 375 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 KIR2DL5BQ8NHK3 375 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 RNASEH2CQ8TDP1 164 aaKnown RBP19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 MS4A6AQ9H2W1 248 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 SHPKQ9UHJ6 478 aa19.24■□□□□ 0.67
NPLOC4-215ENST00000574095 TRAV30A0A087WSZ9 112 aa19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 DNASE2O00115 360 aaPredicted RBP19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 SCGB2A1O75556 95 aa19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 ANXA3P12429 323 aa19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 CCR6P51684 374 aa19.23■□□□□ 0.67
NPLOC4-215ENST00000574095 RND2P52198 227 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms