RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 TMEM50AO95807 157 aa8.38□□□□□ -1.07
RPAIN-214ENST00000574003 RPL5P46777 297 aaKnown RBP8.38□□□□□ -1.07
RPAIN-214ENST00000574003 SSBP1Q04837 148 aaKnown RBP8.38□□□□□ -1.07
RPAIN-214ENST00000574003 TMEM268Q5VZI3 342 aa8.38□□□□□ -1.07
RPAIN-214ENST00000574003 FAM90A2PQ658T7 463 aa8.38□□□□□ -1.07
RPAIN-214ENST00000574003 PVRIGQ6DKI7 326 aa8.38□□□□□ -1.07
RPAIN-214ENST00000574003 DUSP18Q8NEJ0 188 aa8.38□□□□□ -1.07
RPAIN-214ENST00000574003 SOSTQ9BQB4 213 aa8.38□□□□□ -1.07
RPAIN-214ENST00000574003 ZFAND3Q9H8U3 227 aa8.38□□□□□ -1.07
RPAIN-214ENST00000574003 ENY2Q9NPA8 101 aa8.38□□□□□ -1.07
RPAIN-214ENST00000574003 MCUBQ9NWR8 336 aa8.38□□□□□ -1.07
RPAIN-214ENST00000574003 HYDINQ4G0P3 5121 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 TRAV14DV4A0A0A6YYC5 116 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 OR4C46A6NHA9 309 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 INS-IGF2F8WCM5 200 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 GSTZ1O43708 216 aaPredicted RBP8.37□□□□□ -1.07
RPAIN-214ENST00000574003 ATG12O94817 140 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 OPRK1P41145 380 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 TMEM187Q14656 261 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 TIGITQ495A1 244 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 TCF24Q7RTU0 167 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 FAM24BQ8N5W8 94 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 MCFD2Q8NI22 146 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 TMEM170AQ8WVE7 144 aa8.37□□□□□ -1.07
RPAIN-214ENST00000574003 RBPMSQ93062 196 aaKnown RBP8.37□□□□□ -1.07
RPAIN-214ENST00000574003 A0A0J9YWU9 116 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 FABP12A6NFH5 140 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 NOL3O60936 208 aaKnown RBP8.36□□□□□ -1.07
RPAIN-214ENST00000574003 DFFBO76075 338 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 AKR1C4P17516 323 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 NPBWR1P48145 328 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 SPCS3P61009 180 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 DHODHQ02127 395 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 SURF2Q15527 256 aaPredicted RBP8.36□□□□□ -1.07
RPAIN-214ENST00000574003 BSXQ3C1V8 233 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 ZNF600Q6ZNG1 722 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 PRRT1Q99946 306 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 BCL7BQ9BQE9 202 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 VSIRQ9H7M9 311 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 MAP6D1Q9H9H5 199 aa8.36□□□□□ -1.07
RPAIN-214ENST00000574003 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.36□□□□□ -1.07
RPAIN-214ENST00000574003 CEBPZOSA8MTT3 80 aa8.35□□□□□ -1.07
RPAIN-214ENST00000574003 SPRY2O43597 315 aa8.35□□□□□ -1.07
RPAIN-214ENST00000574003 CLN5O75503 358 aa8.35□□□□□ -1.07
RPAIN-214ENST00000574003 IGKV1-17P01599 117 aa8.35□□□□□ -1.07
RPAIN-214ENST00000574003 SUB1P53999 127 aaKnown RBP eCLIP8.35□□□□□ -1.07
RPAIN-214ENST00000574003 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
RPAIN-214ENST00000574003 PMS2P11Q13670 270 aa8.35□□□□□ -1.07
RPAIN-214ENST00000574003 AARDQ4LEZ3 155 aa8.35□□□□□ -1.07
RPAIN-214ENST00000574003 LEMD1Q68G75 181 aa8.35□□□□□ -1.07
RPAIN-214ENST00000574003 LYZL2Q7Z4W2 148 aa8.35□□□□□ -1.07
RPAIN-214ENST00000574003 HEYLQ9NQ87 328 aaPredicted RBP8.35□□□□□ -1.07
RPAIN-214ENST00000574003 RSL24D1Q9UHA3 163 aaKnown RBP8.35□□□□□ -1.07
RPAIN-214ENST00000574003 TMEM56-RWDD3S4R434 201 aa8.35□□□□□ -1.07
RPAIN-214ENST00000574003 CCDC160A6NGH7 325 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 B3GALNT1O75752 331 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 RND2P52198 227 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 APOC4P55056 127 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 DEFB131AP59861 70 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 RPL11P62913 178 aaKnown RBP8.34□□□□□ -1.07
RPAIN-214ENST00000574003 KLF9Q13886 244 aaPredicted RBP8.34□□□□□ -1.07
RPAIN-214ENST00000574003 RBMS2Q15434 407 aaKnown RBP8.34□□□□□ -1.07
RPAIN-214ENST00000574003 ZNF79Q15937 498 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 PYDC2Q56P42 97 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 PRSS54Q6PEW0 395 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 LYG2Q86SG7 212 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 FAM219AQ8IW50 185 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 SLC24A4Q8NFF2 622 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 OR4X1Q8NH49 305 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 OR52E5Q8NH55 327 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 IL17DQ8TAD2 202 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 TRIM63Q969Q1 353 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 GINS3Q9BRX5 216 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 MS4A6AQ9H2W1 248 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 SCP2D1Q9UJQ7 156 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 V9GYH0 126 aa8.34□□□□□ -1.07
RPAIN-214ENST00000574003 DNASE2O00115 360 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-214ENST00000574003 CORTO00230 105 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 SULT1A3P0DMM9 295 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 SULT1A4P0DMN0 295 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 HTR2BP41595 481 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 C2orf83Q53S99 150 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 GSG1LQ6UXU4 331 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 Q6ZWC4 215 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 TMED4Q7Z7H5 227 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 STPG3Q8N7X2 389 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 RNF183Q96D59 192 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 GALNT14Q96FL9 552 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 RBKSQ9H477 322 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 RABL2AQ9UBK7 228 aaPredicted RBP8.33□□□□□ -1.08
RPAIN-214ENST00000574003 RABAC1Q9UI14 185 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 RABL2BQ9UNT1 228 aa8.33□□□□□ -1.08
RPAIN-214ENST00000574003 IGLC1P0CG04 106 aa8.32□□□□□ -1.08
RPAIN-214ENST00000574003 NPPCP23582 126 aa8.32□□□□□ -1.08
RPAIN-214ENST00000574003 NPY1RP25929 384 aa8.32□□□□□ -1.08
RPAIN-214ENST00000574003 P2RY1P47900 373 aa8.32□□□□□ -1.08
RPAIN-214ENST00000574003 NMSQ5H8A3 153 aa8.32□□□□□ -1.08
RPAIN-214ENST00000574003 STXBP6Q8NFX7 210 aa8.32□□□□□ -1.08
RPAIN-214ENST00000574003 NPIPB3Q92617 1050 aa8.32□□□□□ -1.08
RPAIN-214ENST00000574003 ACY3Q96HD9 319 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms