RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PRSS46E5RG02 174 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 H3BP45 60 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 LGALS9O00182 355 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 WRBO00258 174 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 IGKV1-17P01599 117 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 IL5P05113 134 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 FOLR2P14207 255 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 NPY1RP25929 384 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 OPRK1P41145 380 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 HTR2BP41595 481 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 MFAP4P55083 255 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 FAM209BQ5JX69 171 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 PRSS54Q6PEW0 395 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 C12orf45Q8N5I9 185 aaPredicted RBP5.28□□□□□ -1.56
SMG6-209ENST00000571442 ZBTB8BQ8NAP8 495 aaPredicted RBP5.28□□□□□ -1.56
SMG6-209ENST00000571442 UXS1Q8NBZ7 420 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 OR1L6Q8NGR2 347 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 TMEM190Q8WZ59 177 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 BSCL2Q96G97 398 aaPredicted RBP5.28□□□□□ -1.56
SMG6-209ENST00000571442 C11orf1Q9H5F2 150 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 MLXQ9UH92 298 aa5.28□□□□□ -1.56
SMG6-209ENST00000571442 RCL1Q9Y2P8 373 aaKnown RBP5.28□□□□□ -1.56
SMG6-209ENST00000571442 IGKV1D-37A0A075B6S9 117 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 IGHV3-49A0A0A0MS15 119 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 ZNF320A2RRD8 509 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 ZNF785A8K8V0 405 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 FAM90A26D6RGX4 464 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 INMT-MINDY4F8WBC2 141 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 SYNGR2O43760 224 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 CLN5O75503 358 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 SIX6O95475 246 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 IFNA10P01566 189 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 MBPP02686 304 aaPredicted RBP5.27□□□□□ -1.57
SMG6-209ENST00000571442 IGLC1P0CG04 106 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 C8orf88P0DMB2 117 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 GP9P14770 177 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 CBLN1P23435 193 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 INSL3P51460 131 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 RND2P52198 227 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 CD69Q07108 199 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 IL15RAQ13261 267 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 IAH1Q2TAA2 248 aaPredicted RBP5.27□□□□□ -1.57
SMG6-209ENST00000571442 DEFB114Q30KQ6 69 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 TIGITQ495A1 244 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 CD300EQ496F6 205 aaPredicted RBP5.27□□□□□ -1.57
SMG6-209ENST00000571442 SLC16A13Q7RTY0 426 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 OR4X1Q8NH49 305 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 MRAPQ8TCY5 172 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 NPIPB3Q92617 1050 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 MARVELD1Q9BSK0 173 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 HIPK2Q9H2X6 1198 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 ZFAND3Q9H8U3 227 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 SIGLEC8Q9NYZ4 499 aa5.27□□□□□ -1.57
SMG6-209ENST00000571442 ZNF256Q9Y2P7 627 aaPredicted RBP5.27□□□□□ -1.57
SMG6-209ENST00000571442 LSM4Q9Y4Z0 139 aaKnown RBP5.27□□□□□ -1.57
SMG6-209ENST00000571442 IGKV1OR2-108A0A075B7D4 117 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 IGHV3OR16-13A0A075B7E8 117 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 IGHV3-74A0A0B4J1X5 117 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 FAM25EA8MYX2 175 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 K7EPK0 472 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 CORTO00230 105 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 NDUFA4O00483 81 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 CYB5BO43169 146 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 SSSCA1O60232 199 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 GNG7O60262 68 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 SCGB1D2O95969 90 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 APOHP02749 345 aaPredicted RBP5.26□□□□□ -1.57
SMG6-209ENST00000571442 NKX2-1P43699 371 aaPredicted RBP5.26□□□□□ -1.57
SMG6-209ENST00000571442 SUB1P53999 127 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMG6-209ENST00000571442 ARL16Q0P5N6 197 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 FAM106AQ4KMX7 169 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 SPANXN5Q5MJ07 72 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 SPSB3Q6PJ21 355 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 BTNL8Q6UX41 500 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 TOMM20LQ6UXN7 152 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 TMEM61Q8N0U2 210 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 Q8N1Y9 231 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 LILRB2Q8N423 598 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 RNASEH2CQ8TDP1 164 aaKnown RBP5.26□□□□□ -1.57
SMG6-209ENST00000571442 ATP6V0BQ99437 205 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 TXN2Q99757 166 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 C20orf24Q9BUV8 137 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 ELOVL1Q9BW60 279 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 GPR61Q9BZJ8 451 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 GSKIPQ9P0R6 139 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 PEMTQ9UBM1 199 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 PUS1Q9Y606 427 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMG6-209ENST00000571442 U3KQ87 197 aa5.26□□□□□ -1.57
SMG6-209ENST00000571442 IGHV3-66A0A0C4DH42 116 aa5.25□□□□□ -1.57
SMG6-209ENST00000571442 C7orf66A4D0T2 115 aa5.25□□□□□ -1.57
SMG6-209ENST00000571442 C5orf51A6NDU8 294 aa5.25□□□□□ -1.57
SMG6-209ENST00000571442 GOSR2O14653 212 aa5.25□□□□□ -1.57
SMG6-209ENST00000571442 NUPL2O15504 423 aaKnown RBP5.25□□□□□ -1.57
SMG6-209ENST00000571442 SCAF4O95104 1147 aaKnown RBP5.25□□□□□ -1.57
SMG6-209ENST00000571442 LY86O95711 162 aa5.25□□□□□ -1.57
SMG6-209ENST00000571442 IFNA21P01568 189 aa5.25□□□□□ -1.57
SMG6-209ENST00000571442 IFNA4P05014 189 aa5.25□□□□□ -1.57
SMG6-209ENST00000571442 CD7P09564 240 aa5.25□□□□□ -1.57
SMG6-209ENST00000571442 DEFA1P59665 94 aa5.25□□□□□ -1.57
SMG6-209ENST00000571442 DEFA3P59666 94 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms