RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 TEX261Q6UWH6 196 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 ZNF497Q6ZNH5 498 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 SLC16A13Q7RTY0 426 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 C5orf24Q7Z6I8 188 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 SLC38A6Q8IZM9 456 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 OR4A4PQ8NGN8 299 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 OR10X1Q8NGY0 326 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 COQ8AQ8NI60 647 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 UBALD1Q8TB05 177 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 FAM210AQ96ND0 272 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 FOXA2Q9Y261 457 aaPredicted RBP5.07□□□□□ -1.6
CHD3-213ENST00000571249 U3KQ87 197 aa5.07□□□□□ -1.6
CHD3-213ENST00000571249 IGKV1-6A0A0C4DH72 117 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 L7N2F9 121 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 RBMXL2O75526 392 aaKnown RBP5.06□□□□□ -1.6
CHD3-213ENST00000571249 OR2H2O95918 312 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 PPYP01298 95 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 P0DMU3 169 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 FAM231AP0DMU4 169 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 FAM231CP0DMU5 169 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 PGAM2P15259 253 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 S100A11P31949 105 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 HLA-DRB3P79483 266 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 OR2F1Q13607 317 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 TMEM187Q14656 261 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 LTC4SQ16873 150 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 MAJINQ3KP22 176 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 GSG1LQ6UXU4 331 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 Q6ZRM9 215 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 H1FOOQ8IZA3 346 aaPredicted RBP5.06□□□□□ -1.6
CHD3-213ENST00000571249 KCNRGQ8N5I3 272 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 CCDC71LQ8N9Z2 235 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 ZNF680Q8NEM1 530 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 DYNLRB2Q8TF09 96 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 PPP1R1CQ8WVI7 109 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 C2orf50Q96LR7 162 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 NCOR1P1Q9H4R4 102 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 NAA60Q9H7X0 242 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 COMMD9Q9P000 198 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 TNFSF18Q9UNG2 199 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 KCNIP3Q9Y2W7 256 aa5.06□□□□□ -1.6
CHD3-213ENST00000571249 DSCAML1Q8TD84 2053 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 KBTBD11-OT1A0A1B0GTJ5 212 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 DUXBA0A1W2PPF3 345 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 ODAMA1E959 279 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 GAGE12BA1L429 117 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 LINC00862A6NCI5 91 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 RNF222A6NCQ9 220 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 GAGE12HA6NDE8 117 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 ZNF729A6NN14 1252 aaPredicted RBP5.05□□□□□ -1.6
CHD3-213ENST00000571249 C11orf94C9JXX5 98 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 SIRPB1O00241 398 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 IFNA7P01567 189 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 SCTP09683 121 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 NPSP0C0P6 89 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 AREGP15514 252 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 PI3P19957 117 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 AADACP22760 399 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 S100A1P23297 94 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 PSMB6P28072 239 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 GNRHRP30968 328 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 PIGPP57054 158 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 HERV-K104P61576 105 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 MMDQ15546 238 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 HMGN3Q15651 99 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 MSMO1Q15800 293 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 DEFB114Q30KQ6 69 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 PAN3Q58A45 887 aaKnown RBP5.05□□□□□ -1.6
CHD3-213ENST00000571249 PVRIGQ6DKI7 326 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 TMEM182Q6ZP80 229 aaPredicted RBP5.05□□□□□ -1.6
CHD3-213ENST00000571249 ACOT7LQ6ZUV0 252 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 TMUB2Q71RG4 321 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 ZNF546Q86UE3 836 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 PLPPR1Q8TBJ4 325 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 GLYATL2Q8WU03 294 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 RTN4IP1Q8WWV3 396 aaPredicted RBP5.05□□□□□ -1.6
CHD3-213ENST00000571249 C17orf77Q96MU5 243 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 TMEM56Q96MV1 263 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 RNF126Q9BV68 326 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 SLC2A9Q9NRM0 540 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 SELENOKQ9Y6D0 94 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 TMEM56-RWDD3S4R434 201 aa5.05□□□□□ -1.6
CHD3-213ENST00000571249 FXYD6-FXYD2A0A087WZ82 144 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 PIGBOS1A0A0B4J2F0 54 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 TEX13DA0A0J9YY54 714 aaPredicted RBP5.04□□□□□ -1.6
CHD3-213ENST00000571249 RPS10-NUDT3A0A1W2PQS6 291 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 TMEM30CPA0ZSE6 113 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 H0YIZ8 118 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 GPR31O00270 319 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 CCSO14618 274 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 DEFB4AO15263 64 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 MPPED1O15442 326 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 ARPC5O15511 151 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 ADAP1O75689 374 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 IFNA10P01566 189 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 HLA-DRB1P01911 266 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 TRGV3P03979 118 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 ZNF44P15621 663 aa5.04□□□□□ -1.6
CHD3-213ENST00000571249 RCC1P18754 421 aaPredicted RBP5.04□□□□□ -1.6
CHD3-213ENST00000571249 SRPXP78539 464 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms