RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CXorf58Q96LI9 332 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 RANGRFQ9HD47 186 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-205ENST00000571028 DNAH1Q9P2D7 4330 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 CACFD1Q9UGQ2 172 aa10.2□□□□□ -0.78
CCDC40-205ENST00000571028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.19□□□□□ -0.78
CCDC40-205ENST00000571028 SNRPGP15A8MWD9 76 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 INS-IGF2F8WCM5 200 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 SYNGR2O43760 224 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 SSSCA1O60232 199 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 CLEC3BP05452 202 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 NPY1RP25929 384 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 GPR183P32249 361 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 ARL3P36405 182 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 MLANAQ16655 118 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 RPEL1Q2QD12 228 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 ACSM6Q6P461 480 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 DCUN1D4Q92564 292 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 CCDC140Q96MF4 163 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 CITED4Q96RK1 184 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 C21orf62Q9NYP8 219 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 LSM5Q9Y4Y9 91 aaKnown RBP10.19□□□□□ -0.78
CCDC40-205ENST00000571028 ALG5Q9Y673 324 aa10.19□□□□□ -0.78
CCDC40-205ENST00000571028 TRBV7-1A0A0A6YYK4 115 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 IGHV3-35A0A0C4DH35 117 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 OR2T8A6NH00 312 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 FAM90A26D6RGX4 464 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 H3BP45 60 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 K7EIM0 57 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 IFNA4P05014 189 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 OPRK1P41145 380 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 S100A10P60903 97 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 SPANXN5Q5MJ07 72 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 ZNF114Q8NC26 417 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 ZNF502Q8TBZ5 544 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 DLX4Q92988 240 aaPredicted RBP10.18□□□□□ -0.78
CCDC40-205ENST00000571028 C2orf50Q96LR7 162 aa10.18□□□□□ -0.78
CCDC40-205ENST00000571028 RCL1Q9Y2P8 373 aaKnown RBP10.18□□□□□ -0.78
CCDC40-205ENST00000571028 DNAH7Q8WXX0 4024 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 I3L2K1 104 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 BMPR1BO00238 502 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 OR2C1O95371 312 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 MBPP02686 304 aaPredicted RBP10.17□□□□□ -0.78
CCDC40-205ENST00000571028 ZP3P21754 424 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 MFAP4P55083 255 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 SYNJ2BPP57105 145 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 ID3Q02535 119 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 KLK9Q2XQG4 91 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 C2orf83Q53S99 150 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 VN1R17PQ8TDU5 208 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 PSENENQ9NZ42 101 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 MGAT4CQ9UBM8 478 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 KLK9Q9UKQ9 250 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 U3KQ87 197 aa10.17□□□□□ -0.78
CCDC40-205ENST00000571028 L7N2F9 121 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 CORTO00230 105 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 OVOL1O14753 267 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 GGCTO75223 188 aaKnown RBP10.16□□□□□ -0.78
CCDC40-205ENST00000571028 VAMP2P63027 116 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 RPP30P78346 268 aaKnown RBP10.16□□□□□ -0.78
CCDC40-205ENST00000571028 FHL3Q13643 280 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 BSXQ3C1V8 233 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 NOXA1Q86UR1 476 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 TMEM170AQ8WVE7 144 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 CIB3Q96Q77 187 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-205ENST00000571028 OR4C12Q96R67 309 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 FNDC4Q9H6D8 234 aaPredicted RBP10.16□□□□□ -0.78
CCDC40-205ENST00000571028 LYSTQ99698 3801 aa10.16□□□□□ -0.78
CCDC40-205ENST00000571028 RPS10-NUDT3A0A1W2PQS6 291 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 ZNF320A2RRD8 509 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 C7orf66A4D0T2 115 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 C15orf62A8K5M9 175 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 GNG7O60262 68 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 FRMD6-AS1P0C7T7 363 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 BCAP31P51572 246 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 RAB11AP62491 216 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 OXA1LQ15070 435 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 LRRC37A5PQ49AS3 106 aa10.15□□□□□ -0.78
CCDC40-205ENST00000571028 WDR89Q96FK6 387 aaPredicted RBP10.15□□□□□ -0.78
CCDC40-205ENST00000571028 MRPL36Q9P0J6 103 aaKnown RBP10.15□□□□□ -0.78
CCDC40-205ENST00000571028 STRAPQ9Y3F4 350 aaKnown RBP10.15□□□□□ -0.78
CCDC40-205ENST00000571028 IGHV3OR16-8A0A075B7F1 116 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 K7EPK0 472 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 TGOLN2O43493 480 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 INSL3P51460 131 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 RAB32Q13637 225 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 FAM209BQ5JX69 171 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 OR8G2PQ6IF36 304 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 RNASEH2CQ8TDP1 164 aaKnown RBP10.14□□□□□ -0.79
CCDC40-205ENST00000571028 ACY3Q96HD9 319 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 CHRDL1Q9BU40 450 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 MED28Q9H204 178 aa10.14□□□□□ -0.79
CCDC40-205ENST00000571028 HUWE1Q7Z6Z7 4374 aaKnown RBP10.14□□□□□ -0.79
CCDC40-205ENST00000571028 F8W735 103 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-205ENST00000571028 NUPL2O15504 423 aaKnown RBP10.13□□□□□ -0.79
CCDC40-205ENST00000571028 YIF1AO95070 293 aa10.13□□□□□ -0.79
CCDC40-205ENST00000571028 TMEM50AO95807 157 aa10.13□□□□□ -0.79
CCDC40-205ENST00000571028 NPBWR1P48145 328 aa10.13□□□□□ -0.79
CCDC40-205ENST00000571028 RND2P52198 227 aa10.13□□□□□ -0.79
CCDC40-205ENST00000571028 KLF5Q13887 457 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-205ENST00000571028 FCN2Q15485 313 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms