RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 VSIRQ9H7M9 311 aa13.81□□□□□ -0.2
SCARF1-204ENST00000570902 TMEM14BQ9NUH8 114 aa13.81□□□□□ -0.2
SCARF1-204ENST00000570902 IGHV4-4A0A075B6R2 117 aa13.8□□□□□ -0.2
SCARF1-204ENST00000570902 MT-CO2P00403 227 aa13.8□□□□□ -0.2
SCARF1-204ENST00000570902 PGAM2P15259 253 aa13.8□□□□□ -0.2
SCARF1-204ENST00000570902 HLA-DMBP28068 263 aa13.8□□□□□ -0.2
SCARF1-204ENST00000570902 RPL11P62913 178 aaKnown RBP13.8□□□□□ -0.2
SCARF1-204ENST00000570902 ST8SIA2Q92186 375 aa13.8□□□□□ -0.2
SCARF1-204ENST00000570902 RBM38Q9H0Z9 239 aaKnown RBP13.8□□□□□ -0.2
SCARF1-204ENST00000570902 FAT2Q9NYQ8 4349 aa13.79□□□□□ -0.2
SCARF1-204ENST00000570902 IGHV4-28A0A0C4DH34 117 aa13.79□□□□□ -0.2
SCARF1-204ENST00000570902 UCP3P55916 312 aa13.79□□□□□ -0.2
SCARF1-204ENST00000570902 MRPS10P82664 201 aaKnown RBP13.79□□□□□ -0.2
SCARF1-204ENST00000570902 IL18Q14116 193 aa13.79□□□□□ -0.2
SCARF1-204ENST00000570902 ZNF114Q8NC26 417 aa13.79□□□□□ -0.2
SCARF1-204ENST00000570902 OR4D10Q8NGI6 311 aa13.79□□□□□ -0.2
SCARF1-204ENST00000570902 TMEM231Q9H6L2 316 aa13.79□□□□□ -0.2
SCARF1-204ENST00000570902 A0A1B0GVY2 172 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 DBX1A6NMT0 343 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 RBMY1A1P0DJD3 496 aaKnown RBP13.78□□□□□ -0.2
SCARF1-204ENST00000570902 RBMY1CP0DJD4 496 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 SPP1P10451 314 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 PI3P19957 117 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 TBPP20226 339 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 TNFSF8P32971 234 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 TAS2R19P59542 299 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 RBMY1FQ15415 496 aaKnown RBP13.78□□□□□ -0.2
SCARF1-204ENST00000570902 PVRIGQ6DKI7 326 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 MORN3Q6PF18 240 aaPredicted RBP13.78□□□□□ -0.2
SCARF1-204ENST00000570902 TOMM20LQ6UXN7 152 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 Q6ZTC4 211 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 ARRDC1Q8N5I2 433 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 TMEM229BQ8NBD8 167 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 SMIM4Q8WVI0 70 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 RNF126Q9BV68 326 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 RSL24D1Q9UHA3 163 aaKnown RBP13.78□□□□□ -0.2
SCARF1-204ENST00000570902 PKHD1P08F94 4074 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 DNAH2Q9P225 4427 aa13.78□□□□□ -0.2
SCARF1-204ENST00000570902 RAB3DO95716 219 aa13.77□□□□□ -0.21
SCARF1-204ENST00000570902 PPP5CP53041 499 aa13.77□□□□□ -0.21
SCARF1-204ENST00000570902 SSBP1Q04837 148 aaKnown RBP13.77□□□□□ -0.21
SCARF1-204ENST00000570902 SCGB2B2Q4G0G5 96 aa13.77□□□□□ -0.21
SCARF1-204ENST00000570902 LHFPL1Q86WI0 220 aa13.77□□□□□ -0.21
SCARF1-204ENST00000570902 OR4A16Q8NH70 328 aa13.77□□□□□ -0.21
SCARF1-204ENST00000570902 PINX1Q96BK5 328 aaKnown RBP13.77□□□□□ -0.21
SCARF1-204ENST00000570902 RABL2AQ9UBK7 228 aaPredicted RBP13.77□□□□□ -0.21
SCARF1-204ENST00000570902 RABAC1Q9UI14 185 aa13.77□□□□□ -0.21
SCARF1-204ENST00000570902 RABL2BQ9UNT1 228 aa13.77□□□□□ -0.21
SCARF1-204ENST00000570902 ZNF705EA8MWA4 302 aaPredicted RBP13.76□□□□□ -0.21
SCARF1-204ENST00000570902 CTDSPLO15194 276 aa13.76□□□□□ -0.21
SCARF1-204ENST00000570902 IGHV3-48P01763 117 aa13.76□□□□□ -0.21
SCARF1-204ENST00000570902 APOHP02749 345 aaPredicted RBP13.76□□□□□ -0.21
SCARF1-204ENST00000570902 CD74P04233 296 aa13.76□□□□□ -0.21
SCARF1-204ENST00000570902 NPBWR1P48145 328 aa13.76□□□□□ -0.21
SCARF1-204ENST00000570902 PRCDQ00LT1 54 aa13.76□□□□□ -0.21
SCARF1-204ENST00000570902 STEAP1BQ6NZ63 245 aa13.76□□□□□ -0.21
SCARF1-204ENST00000570902 ZNF600Q6ZNG1 722 aa13.76□□□□□ -0.21
SCARF1-204ENST00000570902 TRPT1Q86TN4 253 aaKnown RBP13.76□□□□□ -0.21
SCARF1-204ENST00000570902 LILRB2Q8N423 598 aa13.76□□□□□ -0.21
SCARF1-204ENST00000570902 FAM24BQ8N5W8 94 aa13.76□□□□□ -0.21
SCARF1-204ENST00000570902 FAM212BQ9NTI7 297 aaPredicted RBP13.76□□□□□ -0.21
SCARF1-204ENST00000570902 IGHV3-66A0A0C4DH42 116 aa13.75□□□□□ -0.21
SCARF1-204ENST00000570902 FABP12A6NFH5 140 aa13.75□□□□□ -0.21
SCARF1-204ENST00000570902 GIG44P09565 113 aaPredicted RBP13.75□□□□□ -0.21
SCARF1-204ENST00000570902 PIGPP57054 158 aa13.75□□□□□ -0.21
SCARF1-204ENST00000570902 ERHP84090 104 aaKnown RBP13.75□□□□□ -0.21
SCARF1-204ENST00000570902 FAAP20Q6NZ36 180 aa13.75□□□□□ -0.21
SCARF1-204ENST00000570902 H2BFWTQ7Z2G1 175 aa13.75□□□□□ -0.21
SCARF1-204ENST00000570902 SOSTQ9BQB4 213 aa13.75□□□□□ -0.21
SCARF1-204ENST00000570902 PUS1Q9Y606 427 aaKnown RBP eCLIP13.75□□□□□ -0.21
SCARF1-204ENST00000570902 A0A1W2PS18 150 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 PRSS29PA6NIE9 313 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 ZNF701M0R085 212 aaPredicted RBP13.74□□□□□ -0.21
SCARF1-204ENST00000570902 AMBPP02760 352 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 P0DMU3 169 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 FAM231AP0DMU4 169 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 FAM231CP0DMU5 169 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 POM121L12Q8N7R1 296 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 TERB2Q8NHR7 220 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 ZNF486Q96H40 463 aaPredicted RBP13.74□□□□□ -0.21
SCARF1-204ENST00000570902 GRAMD2BQ96HH9 432 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 ZFAND3Q9H8U3 227 aa13.74□□□□□ -0.21
SCARF1-204ENST00000570902 DNAH17Q9UFH2 4485 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 ELOA3CA0A087WX78 387 aaPredicted RBP13.73□□□□□ -0.21
SCARF1-204ENST00000570902 GSTZ1O43708 216 aaPredicted RBP13.73□□□□□ -0.21
SCARF1-204ENST00000570902 IGKV1-39P01597 117 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 IGKV1D-39P04432 117 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 NPPCP23582 126 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 RND3P61587 244 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 HSPE1P61604 102 aaKnown RBP13.73□□□□□ -0.21
SCARF1-204ENST00000570902 MEF2DQ14814 521 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 OR13C8Q8NGS7 320 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 ZFAND1Q8TCF1 268 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 MARCH1Q8TCQ1 289 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 MRGPRFQ96AM1 343 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 SEC22AQ96IW7 307 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 TBC1D24Q9ULP9 559 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 X6R8D5 127 aa13.73□□□□□ -0.21
SCARF1-204ENST00000570902 DEFB131BA0A096LNP1 70 aa13.72□□□□□ -0.21
SCARF1-204ENST00000570902 K7EQG2 157 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms