RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 IGHV3OR16-8A0A075B7F1 116 aa12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 ANKRD20A5PA0PJZ0 165 aa12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 ZNF207O43670 478 aaKnown RBP12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 TMEM50AO95807 157 aa12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 FAAP20Q6NZ36 180 aa12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 TOMM20LQ6UXN7 152 aa12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 Q6ZRM9 215 aa12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 LHFPL5Q8TAF8 219 aa12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 IL22RA2Q969J5 263 aa12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 RSL24D1Q9UHA3 163 aaKnown RBP12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 TMEM56-RWDD3S4R434 201 aa12.66□□□□□ -0.38
MAP1LC3B-208ENST00000570189 TRAV2A0A0B4J234 112 aa12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 ETV6P41212 452 aa12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 HOXA1P49639 335 aaPredicted RBP12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 TNFRSF9Q07011 255 aa12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SPINK9Q5DT21 86 aa12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 SELENOHQ8IZQ5 122 aaKnown RBP12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 OR4X1Q8NH49 305 aa12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 FNDC4Q9H6D8 234 aaPredicted RBP12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 ENY2Q9NPA8 101 aa12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 UBQLN2Q9UHD9 624 aa12.65□□□□□ -0.38
MAP1LC3B-208ENST00000570189 H3BMQ9 156 aa12.64□□□□□ -0.39
MAP1LC3B-208ENST00000570189 CLN5O75503 358 aa12.64□□□□□ -0.39
MAP1LC3B-208ENST00000570189 YIF1AO95070 293 aa12.64□□□□□ -0.39
MAP1LC3B-208ENST00000570189 IGHV3-48P01763 117 aa12.64□□□□□ -0.39
MAP1LC3B-208ENST00000570189 HTR2BP41595 481 aa12.64□□□□□ -0.39
MAP1LC3B-208ENST00000570189 RNASE11Q8TAA1 199 aaKnown RBP12.64□□□□□ -0.39
MAP1LC3B-208ENST00000570189 SCGB2A1O75556 95 aa12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 C2orf83Q53S99 150 aa12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 STPG3Q8N7X2 389 aa12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 OR51S1Q8NGJ8 323 aa12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 RNF183Q96D59 192 aa12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 SCGB3A2Q96PL1 93 aa12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 MAP6D1Q9H9H5 199 aa12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 SCP2D1Q9UJQ7 156 aa12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 PUS1Q9Y606 427 aaKnown RBP eCLIP12.63□□□□□ -0.39
MAP1LC3B-208ENST00000570189 TRAV30A0A087WSZ9 112 aa12.62□□□□□ -0.39
MAP1LC3B-208ENST00000570189 A0A1B0GU03 582 aa12.62□□□□□ -0.39
MAP1LC3B-208ENST00000570189 SPRY2O43597 315 aa12.62□□□□□ -0.39
MAP1LC3B-208ENST00000570189 TNFSF8P32971 234 aa12.62□□□□□ -0.39
MAP1LC3B-208ENST00000570189 OPRK1P41145 380 aa12.62□□□□□ -0.39
MAP1LC3B-208ENST00000570189 PAFAH1B2P68402 229 aa12.62□□□□□ -0.39
MAP1LC3B-208ENST00000570189 RNASEH2CQ8TDP1 164 aaKnown RBP12.62□□□□□ -0.39
MAP1LC3B-208ENST00000570189 RPS10-NUDT3A0A1W2PQS6 291 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 NOL3O60936 208 aaKnown RBP12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 DFFBO76075 338 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 SLC25A4P12235 298 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 CRYBB3P26998 211 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 TMEM187Q14656 261 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 NMSQ5H8A3 153 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 TMEM268Q5VZI3 342 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 TCF24Q7RTU0 167 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 DEDD2Q8WXF8 326 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 ST8SIA2Q92186 375 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 TMEM230Q96A57 120 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 GPR146Q96CH1 333 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 TMEM231Q9H6L2 316 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 MRPL36Q9P0J6 103 aaKnown RBP12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 CACNG5Q9UF02 275 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 PLECQ15149 4684 aaKnown RBP12.61□□□□□ -0.39
MAP1LC3B-208ENST00000570189 HYDINQ4G0P3 5121 aa12.6□□□□□ -0.39
MAP1LC3B-208ENST00000570189 PIGBOS1A0A0B4J2F0 54 aa12.6□□□□□ -0.39
MAP1LC3B-208ENST00000570189 A0A1W2PS18 150 aa12.6□□□□□ -0.39
MAP1LC3B-208ENST00000570189 IGKV1-17P01599 117 aa12.6□□□□□ -0.39
MAP1LC3B-208ENST00000570189 DEFB135Q30KP9 77 aa12.6□□□□□ -0.39
MAP1LC3B-208ENST00000570189 ALMS1Q8TCU4 4167 aa12.6□□□□□ -0.39
MAP1LC3B-208ENST00000570189 A0A0B4J2A0 478 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 FABP12A6NFH5 140 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 JTBO76095 146 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 APOHP02749 345 aaPredicted RBP12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 NPPCP23582 126 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 NOXA1Q86UR1 476 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 LILRB2Q8N423 598 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 SLC24A4Q8NFF2 622 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 GATAD1Q8WUU5 269 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 MS4A6AQ9H2W1 248 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 HEYLQ9NQ87 328 aaPredicted RBP12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 SHPKQ9UHJ6 478 aa12.59□□□□□ -0.39
MAP1LC3B-208ENST00000570189 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 IGLC1P0CG04 106 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 SULT1A3P0DMM9 295 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 SULT1A4P0DMN0 295 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 CCR6P51684 374 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 ATP5IP56385 69 aaPredicted RBP12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 YPEL3P61236 119 aaPredicted RBP12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 SUPT4H1P63272 117 aaKnown RBP12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 SRPXP78539 464 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 ETFRF1Q6IPR1 90 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 PRSS54Q6PEW0 395 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 LYG2Q86SG7 212 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 APRG1Q8IVJ8 170 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 OR1S2Q8NGQ3 325 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 TMEM170AQ8WVE7 144 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 TRIM63Q969Q1 353 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 GRAMD2BQ96HH9 432 aa12.58□□□□□ -0.4
MAP1LC3B-208ENST00000570189 METTL26Q96S19 204 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms