RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 ENY2Q9NPA8 101 aa12.43□□□□□ -0.42
EDC3-216ENST00000569561 SMPXQ9UHP9 88 aa12.43□□□□□ -0.42
EDC3-216ENST00000569561 ZNF207O43670 478 aaKnown RBP12.42□□□□□ -0.42
EDC3-216ENST00000569561 GNG7O60262 68 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 TMEM50AO95807 157 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 HTR2BP41595 481 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 CCR6P51684 374 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 SRPXP78539 464 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 MLANAQ16655 118 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 ANKRD55Q3KP44 614 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 TMEM128Q5BJH2 165 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 LGI3Q8N145 548 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 DUSP18Q8NEJ0 188 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 OR4X1Q8NH49 305 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 SPAG8Q99932 426 aaPredicted RBP12.42□□□□□ -0.42
EDC3-216ENST00000569561 TUBA4BQ9H853 241 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 ZMAT4Q9H898 229 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 HSPB7Q9UBY9 170 aa12.42□□□□□ -0.42
EDC3-216ENST00000569561 IGHV7-4-1A0A0J9YVY3 117 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 CHEK1O14757 476 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 PITX3O75364 302 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 CLN5O75503 358 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 TNFRSF9Q07011 255 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 SMCO1Q147U7 214 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 TOMM20LQ6UXN7 152 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 SLC16A13Q7RTY0 426 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 TMED4Q7Z7H5 227 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 SLC24A4Q8NFF2 622 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 CITED4Q96RK1 184 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 SRD5A3Q9H8P0 318 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 NDUFA13Q9P0J0 144 aa12.41□□□□□ -0.42
EDC3-216ENST00000569561 A0A1B0GU03 582 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 DUXBA0A1W2PPF3 345 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 IGKV1-17P01599 117 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 ANXA3P12429 323 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 BTCP35070 178 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 OPRK1P41145 380 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 PPP1R1AQ13522 171 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 FAM90A2PQ658T7 463 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 ZNF600Q6ZNG1 722 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 RBPMS2Q6ZRY4 209 aaKnown RBP12.4□□□□□ -0.42
EDC3-216ENST00000569561 OR52B4Q8NGK2 314 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 RNASEH2CQ8TDP1 164 aaKnown RBP12.4□□□□□ -0.42
EDC3-216ENST00000569561 RNF2Q99496 336 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 HIPK2Q9H2X6 1198 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 EDA2RQ9HAV5 297 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 CACFD1Q9UGQ2 172 aa12.4□□□□□ -0.42
EDC3-216ENST00000569561 DYNC2H1Q8NCM8 4307 aaKnown RBP12.4□□□□□ -0.43
EDC3-216ENST00000569561 CEBPZOSA8MTT3 80 aa12.39□□□□□ -0.43
EDC3-216ENST00000569561 NXPH3O95157 252 aa12.39□□□□□ -0.43
EDC3-216ENST00000569561 SFT2D2O95562 160 aa12.39□□□□□ -0.43
EDC3-216ENST00000569561 RBMS2Q15434 407 aaKnown RBP12.39□□□□□ -0.43
EDC3-216ENST00000569561 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
EDC3-216ENST00000569561 PRSS54Q6PEW0 395 aa12.39□□□□□ -0.43
EDC3-216ENST00000569561 TMEM116Q8NCL8 245 aa12.39□□□□□ -0.43
EDC3-216ENST00000569561 RHPN1-AS1Q9BWJ2 59 aa12.39□□□□□ -0.43
EDC3-216ENST00000569561 VSIRQ9H7M9 311 aa12.39□□□□□ -0.43
EDC3-216ENST00000569561 HEYLQ9NQ87 328 aaPredicted RBP12.39□□□□□ -0.43
EDC3-216ENST00000569561 PUS1Q9Y606 427 aaKnown RBP eCLIP12.39□□□□□ -0.43
EDC3-216ENST00000569561 STARD9Q9P2P6 4700 aa12.39□□□□□ -0.43
EDC3-216ENST00000569561 NAP1L6A6NFF2 107 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 YIF1AO95070 293 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 NDUFB6O95139 128 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 IGLC1P0CG04 106 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 SLC25A6P12236 298 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 NPY1RP25929 384 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 CENPSQ8N2Z9 138 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 LILRB2Q8N423 598 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 FAM110AQ9BQ89 295 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 RBKSQ9H477 322 aa12.38□□□□□ -0.43
EDC3-216ENST00000569561 RYR3Q15413 4870 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 IGHV3-49A0A0A0MS15 119 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 TRAV14DV4A0A0A6YYC5 116 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 APOHP02749 345 aaPredicted RBP12.37□□□□□ -0.43
EDC3-216ENST00000569561 IL7P13232 177 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 VAMP1P23763 118 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 UBE2MP61081 183 aaKnown RBP12.37□□□□□ -0.43
EDC3-216ENST00000569561 TRIQKQ629K1 86 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 LAMTOR1Q6IAA8 161 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 DTD1Q8TEA8 209 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 RETNQ9HD89 108 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 NBEAL2Q6ZNJ1 2754 aa12.37□□□□□ -0.43
EDC3-216ENST00000569561 RPS10-NUDT3A0A1W2PQS6 291 aa12.36□□□□□ -0.43
EDC3-216ENST00000569561 SLC25A4P12235 298 aa12.36□□□□□ -0.43
EDC3-216ENST00000569561 ST8SIA2Q92186 375 aa12.36□□□□□ -0.43
EDC3-216ENST00000569561 GINS3Q9BRX5 216 aa12.36□□□□□ -0.43
EDC3-216ENST00000569561 FLVCR2Q9UPI3 526 aa12.36□□□□□ -0.43
EDC3-216ENST00000569561 U3KQ87 197 aa12.36□□□□□ -0.43
EDC3-216ENST00000569561 CSMD3Q7Z407 3707 aa12.36□□□□□ -0.43
EDC3-216ENST00000569561 IGHV3OR16-13A0A075B7E8 117 aa12.35□□□□□ -0.43
EDC3-216ENST00000569561 IGHV3-74A0A0B4J1X5 117 aa12.35□□□□□ -0.43
EDC3-216ENST00000569561 RND2P52198 227 aa12.35□□□□□ -0.43
EDC3-216ENST00000569561 TIGITQ495A1 244 aa12.35□□□□□ -0.43
EDC3-216ENST00000569561 MUC7Q8TAX7 377 aa12.35□□□□□ -0.43
EDC3-216ENST00000569561 C7orf50Q9BRJ6 194 aaKnown RBP12.35□□□□□ -0.43
EDC3-216ENST00000569561 TMED3Q9Y3Q3 217 aa12.35□□□□□ -0.43
EDC3-216ENST00000569561 TRAV30A0A087WSZ9 112 aa12.34□□□□□ -0.43
EDC3-216ENST00000569561 C9orf170A2RU37 121 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms