RNA–Protein interactions for RNA: ENST00000569390.1

NEIL1-222, Transcript of nei like DNA glycosylase 1, human

TSL 3

Gene NEIL1, Length 346 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEIL1-222	ENST00000569390	HTR2B	P41595	481 aa		13.95	□□□□□ -0.18
NEIL1-222	ENST00000569390	CMC4	P56277	68 aa	Predicted RBP	13.95	□□□□□ -0.18
NEIL1-222	ENST00000569390	BSX	Q3C1V8	233 aa		13.95	□□□□□ -0.18
NEIL1-222	ENST00000569390		Q6ZRM9	215 aa		13.95	□□□□□ -0.18
NEIL1-222	ENST00000569390	LHFPL5	Q8TAF8	219 aa		13.95	□□□□□ -0.18
NEIL1-222	ENST00000569390	ZNF414	Q96IQ9	312 aa		13.95	□□□□□ -0.18
NEIL1-222	ENST00000569390	MCUB	Q9NWR8	336 aa		13.95	□□□□□ -0.18
NEIL1-222	ENST00000569390	TMEM50A	O95807	157 aa		13.94	□□□□□ -0.18
NEIL1-222	ENST00000569390	OPRK1	P41145	380 aa		13.94	□□□□□ -0.18
NEIL1-222	ENST00000569390	APOC4	P55056	127 aa		13.94	□□□□□ -0.18
NEIL1-222	ENST00000569390	AP3S2	P59780	193 aa		13.94	□□□□□ -0.18
NEIL1-222	ENST00000569390	RYR3	Q15413	4870 aa		13.94	□□□□□ -0.18
NEIL1-222	ENST00000569390	RNF2	Q99496	336 aa		13.94	□□□□□ -0.18
NEIL1-222	ENST00000569390	CACNG5	Q9UF02	275 aa		13.94	□□□□□ -0.18
NEIL1-222	ENST00000569390	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.93	□□□□□ -0.18
NEIL1-222	ENST00000569390	ANXA3	P12429	323 aa		13.93	□□□□□ -0.18
NEIL1-222	ENST00000569390	SRPX	P78539	464 aa		13.93	□□□□□ -0.18
NEIL1-222	ENST00000569390	ODF3L2	Q3SX64	289 aa		13.93	□□□□□ -0.18
NEIL1-222	ENST00000569390	ZFAND6	Q6FIF0	208 aa		13.93	□□□□□ -0.18
NEIL1-222	ENST00000569390	TOMM20L	Q6UXN7	152 aa		13.93	□□□□□ -0.18
NEIL1-222	ENST00000569390	OR4X1	Q8NH49	305 aa		13.93	□□□□□ -0.18
NEIL1-222	ENST00000569390	DEDD2	Q8WXF8	326 aa		13.93	□□□□□ -0.18
NEIL1-222	ENST00000569390	HEYL	Q9NQ87	328 aa	Predicted RBP	13.93	□□□□□ -0.18
NEIL1-222	ENST00000569390	TRAV30	A0A087WSZ9	112 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	CCDC160	A6NGH7	325 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	UBE2C	O00762	179 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	CLN5	O75503	358 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	SULT1A3	P0DMM9	295 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	SULT1A4	P0DMN0	295 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	S100A5	P33763	92 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	PAFAH1B2	P68402	229 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	TMEM187	Q14656	261 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	NOXA1	Q86UR1	476 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	GPR146	Q96CH1	333 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	TMEM231	Q9H6L2	316 aa		13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
NEIL1-222	ENST00000569390		A0A0B4J2A0	478 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	KIR2DL5B	A0A0G2JN68	375 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	KIR2DL5B	A0A0G2JPC4	375 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	CEBPZOS	A8MTT3	80 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	C2orf83	Q53S99	150 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390		Q6ZWC4	215 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	KIR2DL5A	Q8N109	375 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	KIR2DL5B	Q8NHK3	375 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	TMEM230	Q96A57	120 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	VSIR	Q9H7M9	311 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	UBQLN2	Q9UHD9	624 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	SHPK	Q9UHJ6	478 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390	TP53TG1	Q9Y2A0	90 aa		13.91	□□□□□ -0.18
NEIL1-222	ENST00000569390		A0A1W2PS18	150 aa		13.9	□□□□□ -0.18
NEIL1-222	ENST00000569390	SLC25A4	P12235	298 aa		13.9	□□□□□ -0.18
NEIL1-222	ENST00000569390	PYDC2	Q56P42	97 aa		13.9	□□□□□ -0.18
NEIL1-222	ENST00000569390	FAM90A2P	Q658T7	463 aa		13.9	□□□□□ -0.18
NEIL1-222	ENST00000569390	TOMM5	Q8N4H5	51 aa		13.9	□□□□□ -0.18
NEIL1-222	ENST00000569390	SLC24A4	Q8NFF2	622 aa		13.9	□□□□□ -0.18
NEIL1-222	ENST00000569390	OVOL2	Q9BRP0	275 aa		13.9	□□□□□ -0.18
NEIL1-222	ENST00000569390	ZFAND3	Q9H8U3	227 aa		13.9	□□□□□ -0.18
NEIL1-222	ENST00000569390	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.9	□□□□□ -0.18
NEIL1-222	ENST00000569390	IGHV3-49	A0A0A0MS15	119 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	ZNF701	M0R085	212 aa	Predicted RBP	13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	AKR1C4	P17516	323 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	CCR6	P51684	374 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	KLF9	Q13886	244 aa	Predicted RBP	13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	NMS	Q5H8A3	153 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	ETFRF1	Q6IPR1	90 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	TCF24	Q7RTU0	167 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	LGI3	Q8N145	548 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	STPG3	Q8N7X2	389 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	TRIM63	Q969Q1	353 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390		V9GYH0	126 aa		13.89	□□□□□ -0.19
NEIL1-222	ENST00000569390	TRAV2	A0A0B4J234	112 aa		13.88	□□□□□ -0.19
NEIL1-222	ENST00000569390		A0A1B0GU03	582 aa		13.88	□□□□□ -0.19
NEIL1-222	ENST00000569390	NPPC	P23582	126 aa		13.88	□□□□□ -0.19
NEIL1-222	ENST00000569390	SUPT4H1	P63272	117 aa	Known RBP	13.88	□□□□□ -0.19
NEIL1-222	ENST00000569390	WFDC3	Q8IUB2	231 aa		13.88	□□□□□ -0.19
NEIL1-222	ENST00000569390	ST8SIA2	Q92186	375 aa		13.88	□□□□□ -0.19
NEIL1-222	ENST00000569390	NARS2	Q96I59	477 aa	Known RBP	13.88	□□□□□ -0.19
NEIL1-222	ENST00000569390	METTL26	Q96S19	204 aa		13.88	□□□□□ -0.19
NEIL1-222	ENST00000569390	TENM2	Q9NT68	2774 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	IGHV3OR16-13	A0A075B7E8	117 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	IGHV3-74	A0A0B4J1X5	117 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	DUXB	A0A1W2PPF3	345 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	NPY1R	P25929	384 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	ATP5I	P56385	69 aa	Predicted RBP	13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	TNFRSF9	Q07011	255 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	SMCO1	Q147U7	214 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	TMEM128	Q5BJH2	165 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	OR1S2	Q8NGQ3	325 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	MRPL36	Q9P0J6	103 aa	Known RBP	13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390		U3KQ87	197 aa		13.87	□□□□□ -0.19
NEIL1-222	ENST00000569390	LCE6A	A0A183	80 aa		13.86	□□□□□ -0.19
NEIL1-222	ENST00000569390	SPRY2	O43597	315 aa		13.86	□□□□□ -0.19
NEIL1-222	ENST00000569390	DFFB	O76075	338 aa		13.86	□□□□□ -0.19
NEIL1-222	ENST00000569390	IGKV1-17	P01599	117 aa		13.86	□□□□□ -0.19
NEIL1-222	ENST00000569390	TFPI2	P48307	235 aa		13.86	□□□□□ -0.19
NEIL1-222	ENST00000569390	MLANA	Q16655	118 aa		13.86	□□□□□ -0.19
NEIL1-222	ENST00000569390	PRSS54	Q6PEW0	395 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms