RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 OR2T35Q8NGX2 323 aa7.23□□□□□ -1.25
UBR1-210ENST00000569337 CIB3Q96Q77 187 aaPredicted RBP7.23□□□□□ -1.25
UBR1-210ENST00000569337 FNDC4Q9H6D8 234 aaPredicted RBP7.23□□□□□ -1.25
UBR1-210ENST00000569337 MRPL36Q9P0J6 103 aaKnown RBP7.23□□□□□ -1.25
UBR1-210ENST00000569337 S4R3C0 116 aa7.23□□□□□ -1.25
UBR1-210ENST00000569337 U3KQ87 197 aa7.23□□□□□ -1.25
UBR1-210ENST00000569337 NOTCH3Q9UM47 2321 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 IGHV3-21A0A0B4J1V1 117 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 WI2-2373I1.2A0A1W2PRP0 233 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 PRSS46E5RG02 174 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 I3L2K1 104 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 K7EIM0 57 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 L7N2F9 121 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 OVOL1O14753 267 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 TSC22D2O75157 780 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 IGHV3-48P01763 117 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 HSPB1P04792 205 aaKnown RBP7.22□□□□□ -1.25
UBR1-210ENST00000569337 DEFA4P12838 97 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 NPY1RP25929 384 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 INSL3P51460 131 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 TAS2R30P59541 319 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 VAMP2P63027 116 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 ARL16Q0P5N6 197 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 TMEM252Q8N6L7 170 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 OR11H4Q8NGC9 324 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 ASB13Q8WXK3 278 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 DCUN1D4Q92564 292 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 DLX4Q92988 240 aaPredicted RBP7.22□□□□□ -1.25
UBR1-210ENST00000569337 MISP3Q96FF7 219 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 BSCL2Q96G97 398 aaPredicted RBP7.22□□□□□ -1.25
UBR1-210ENST00000569337 NEURL2Q9BR09 285 aa7.22□□□□□ -1.25
UBR1-210ENST00000569337 LYRM2Q9NU23 88 aaPredicted RBP7.22□□□□□ -1.25
UBR1-210ENST00000569337 IGHV4OR15-8A0A075B7B6 117 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 A0A087WW49 117 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 MFSD2BA6NFX1 497 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 E5RGE8 158 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 MT-CO2P00403 227 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 IGHV3-23P01764 117 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 METTL15P1P0C7V9 234 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 P2RY1P47900 373 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 SUB1P53999 127 aaKnown RBP eCLIP7.21□□□□□ -1.26
UBR1-210ENST00000569337 SLURP1P55000 103 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 C15orf32Q32M92 178 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 TCTE3Q8IZS6 198 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 NECAP1Q8NC96 275 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 SCARB1Q8WTV0 552 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 PINX1Q96BK5 328 aaKnown RBP7.21□□□□□ -1.26
UBR1-210ENST00000569337 FBXL7Q9UJT9 491 aa7.21□□□□□ -1.26
UBR1-210ENST00000569337 PAIP2BQ9ULR5 123 aaKnown RBP7.21□□□□□ -1.26
UBR1-210ENST00000569337 STRAPQ9Y3F4 350 aaKnown RBP7.21□□□□□ -1.26
UBR1-210ENST00000569337 PRKDCP78527 4128 aaKnown RBP7.21□□□□□ -1.26
UBR1-210ENST00000569337 ANKRD34BA5PLL1 514 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 RNF222A6NCQ9 220 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
UBR1-210ENST00000569337 SAP30O75446 220 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 CST7O76096 145 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 LY86O95711 162 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 TRBV12-3P01733 135 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 RLN2P04090 185 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 IFNA4P05014 189 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 SLC25A4P12235 298 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 HIST1H1BP16401 226 aaKnown RBP7.2□□□□□ -1.26
UBR1-210ENST00000569337 PVALBP20472 110 aaPredicted RBP7.2□□□□□ -1.26
UBR1-210ENST00000569337 CAV2P51636 162 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 ATP5IP56385 69 aaPredicted RBP7.2□□□□□ -1.26
UBR1-210ENST00000569337 EWSR1Q01844 656 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBR1-210ENST00000569337 NHLH2Q02577 135 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 CD69Q07108 199 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 AKAP14Q86UN6 197 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 OR1L6Q8NGR2 347 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 THAP6Q8TBB0 222 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 USMG5Q96IX5 58 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 CCDC140Q96MF4 163 aa7.2□□□□□ -1.26
UBR1-210ENST00000569337 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 FXYD6-FXYD2A0A087WZ82 144 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 FAM223BA6NKX1 122 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 PET100P0DJ07 73 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 ZP3P21754 424 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 OPRK1P41145 380 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 RAB11AP62491 216 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 RPP30P78346 268 aaKnown RBP7.19□□□□□ -1.26
UBR1-210ENST00000569337 ATP5G2Q06055 141 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 FGL1Q08830 312 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 OR8G2PQ6IF36 304 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 FAM223AQ8IWN6 122 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 TMEM217Q8N7C4 229 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 ZNF502Q8TBZ5 544 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 RNASEH2CQ8TDP1 164 aaKnown RBP7.19□□□□□ -1.26
UBR1-210ENST00000569337 VN1R17PQ8TDU5 208 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 ZNF414Q96IQ9 312 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 ELOVL1Q9BW60 279 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 PEF1Q9UBV8 284 aaKnown RBP7.19□□□□□ -1.26
UBR1-210ENST00000569337 TNFSF18Q9UNG2 199 aa7.19□□□□□ -1.26
UBR1-210ENST00000569337 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.18□□□□□ -1.26
UBR1-210ENST00000569337 PPP5D1E7EU14 171 aa7.18□□□□□ -1.26
UBR1-210ENST00000569337 CORTO00230 105 aa7.18□□□□□ -1.26
UBR1-210ENST00000569337 RPL12P30050 165 aaKnown RBP7.18□□□□□ -1.26
UBR1-210ENST00000569337 GPX4P36969 197 aaPredicted RBP7.18□□□□□ -1.26
UBR1-210ENST00000569337 SULT1A1P50225 295 aa7.18□□□□□ -1.26
UBR1-210ENST00000569337 EXOSC2Q13868 293 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms