RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 A6NDN8 102 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 OR4C45A6NMZ5 311 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 FTCDNL1E5RQL4 147 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 ENSAO43768 121 aaKnown RBP3.63□□□□□ -1.83
UBR1-208ENST00000569066 ORM1P02763 201 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 TACSTD2P09758 323 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 SPINK8P0C7L1 97 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 NTF3P20783 257 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 MTPNP58546 118 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 CATR1Q13166 79 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 MPV17L2Q567V2 206 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 OR2T5Q6IEZ7 315 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 C1orf174Q8IYL3 243 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 ZNF101Q8IZC7 436 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 CA13Q8N1Q1 262 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 OR2T29Q8NH02 315 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 PSMF1Q92530 271 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 AGMATQ9BSE5 352 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 SNRNP25Q9BV90 132 aaKnown RBP3.63□□□□□ -1.83
UBR1-208ENST00000569066 PARP11Q9NR21 331 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 NAT8BQ9UHF3 227 aa3.63□□□□□ -1.83
UBR1-208ENST00000569066 DOCK3Q8IZD9 2030 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 PARP14Q460N5 1801 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 IGHV1-69DA0A0B4J2H0 117 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 GCM2O75603 506 aaPredicted RBP3.62□□□□□ -1.83
UBR1-208ENST00000569066 NDUFB6O95139 128 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 HRASP01112 189 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 KRASP01116 189 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 TTRP02766 147 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 MT-ATP8P03928 68 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 SMIM10L2AP0DMW4 78 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 SMIM10L2BP0DMW5 78 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 SLC25A6P12236 298 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 CMPK1P30085 196 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 SH2D6Q7Z4S9 175 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 OOSP2Q86WS3 158 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 ZIC4Q8N9L1 334 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 C15orf40Q8WUR7 153 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 LINC00477Q96M19 166 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 EIF5A2Q9GZV4 153 aaKnown RBP3.62□□□□□ -1.83
UBR1-208ENST00000569066 CXCL16Q9H2A7 254 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 ZNF442Q9H7R0 627 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 PTPRMP28827 1452 aa3.62□□□□□ -1.83
UBR1-208ENST00000569066 BAZ2BQ9UIF8 2168 aaKnown RBP3.62□□□□□ -1.83
UBR1-208ENST00000569066 hCG_1818297A0A087WSY0 165 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 MUC21A0A0G2JKD1 596 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 MUC21A0A140T8X8 626 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 TINCRA0A1B0GVN0 87 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 GSTZ1O43708 216 aaPredicted RBP3.61□□□□□ -1.83
UBR1-208ENST00000569066 ISG15P05161 165 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 PIPP12273 146 aaPredicted RBP3.61□□□□□ -1.83
UBR1-208ENST00000569066 ATP6V0CP27449 155 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 PFN2P35080 140 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 MYCNOSP40205 109 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 GNG4P50150 75 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 CLDN6P56747 220 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 DIAPH2-AS1Q14236 149 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 ZNF880Q6PDB4 577 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 RPS27LQ71UM5 84 aaKnown RBP3.61□□□□□ -1.83
UBR1-208ENST00000569066 SMIM4Q8WVI0 70 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 PPP1R1CQ8WVI7 109 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 PPCDCQ96CD2 204 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 MS4A6EQ96DS6 147 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 IMP4Q96G21 291 aaKnown RBP3.61□□□□□ -1.83
UBR1-208ENST00000569066 IMMP2LQ96T52 175 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 AMELYQ99218 206 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 SPIN2AQ99865 258 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 SPIN2BQ9BPZ2 258 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 SAMD10Q9BYL1 202 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 TXNIPQ9H3M7 391 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 RDH14Q9HBH5 336 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 RBBP6Q7Z6E9 1792 aaKnown RBP3.61□□□□□ -1.83
UBR1-208ENST00000569066 IGKV6D-41A0A0C4DH26 115 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 A0A1B0GTI1 187 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 TRDV1A0A1B0GX56 115 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 C5orf63A6NC05 138 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 NDUFC2-KCTD14E9PQ53 114 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 GABARAPH6UMI1 98 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 K7EP34 96 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 CSN2P05814 226 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 LINC00694P0DN24 101 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 IGHV1-8P0DP01 117 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 CD99P14209 185 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 ALOX5APP20292 161 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 REG1BP48304 166 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 SULT1A2P50226 295 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 RPL23P62829 140 aaKnown RBP3.61□□□□□ -1.83
UBR1-208ENST00000569066 BVES-AS1Q5T3Y7 98 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 ZNF645Q8N7E2 425 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 GPER1Q99527 375 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 WDR61Q9GZS3 305 aaKnown RBP3.61□□□□□ -1.83
UBR1-208ENST00000569066 RPP21Q9H633 154 aaKnown RBP3.61□□□□□ -1.83
UBR1-208ENST00000569066 AK3Q9UIJ7 227 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 ANXA10Q9UJ72 324 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 V9GYY9 64 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 C2orf16Q68DN1 1984 aa3.61□□□□□ -1.83
UBR1-208ENST00000569066 M0R2Z0 102 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 AKAIN1P0CW23 69 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 SRIP30626 198 aa3.6□□□□□ -1.83
UBR1-208ENST00000569066 SYNJ2BPP57105 145 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms