RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	SELENOK	Q9Y6D0	94 aa		7.8	□□□□□ -1.16
UBR1-207	ENST00000568782	TMEM56-RWDD3	S4R434	201 aa		7.8	□□□□□ -1.16
UBR1-207	ENST00000568782	IGHV3OR16-8	A0A075B7F1	116 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	7.79	□□□□□ -1.16
UBR1-207	ENST00000568782		A0A0B4J2A0	478 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	IGHV7-4-1	A0A0J9YVY3	117 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	IFNA10	P01566	189 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782		P0C879	139 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	SLC25A4	P12235	298 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	NPPC	P23582	126 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	ADM	P35318	185 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	CCR6	P51684	374 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	APOC4	P55056	127 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	RPL11	P62913	178 aa	Known RBP	7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	TMEM128	Q5BJH2	165 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	OR1S1	Q8NH92	325 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	IL17D	Q8TAD2	202 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	RNASEH2C	Q8TDP1	164 aa	Known RBP	7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	GPR146	Q96CH1	333 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	SOST	Q9BQB4	213 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	RHPN1-AS1	Q9BWJ2	59 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	NDUFA13	Q9P0J0	144 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	SHPK	Q9UHJ6	478 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	SMPX	Q9UHP9	88 aa		7.79	□□□□□ -1.16
UBR1-207	ENST00000568782	DUXB	A0A1W2PPF3	345 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	DNASE2	O00115	360 aa	Predicted RBP	7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	CLN5	O75503	358 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	TMEM50A	O95807	157 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	RNASE2	P10153	161 aa	Known RBP	7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	VAMP1	P23763	118 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	EIF2B2	P49770	351 aa	Known RBP	7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	TMEM187	Q14656	261 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	SMCO1	Q147U7	214 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	SLC24A4	Q8NFF2	622 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	GRAMD2B	Q96HH9	432 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	OR10C1	Q96KK4	312 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	METTL26	Q96S19	204 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782	GGTLC1	Q9BX51	225 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782		U3KQ87	197 aa		7.78	□□□□□ -1.16
UBR1-207	ENST00000568782		A0A0G2JRQ6	117 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782		A0A1B0GU03	582 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	NAP1L6	A6NFF2	107 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782		F8W735	103 aa	Predicted RBP	7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	CHEK1	O14757	476 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	MED6	O75586	246 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	NXPH3	O95157	252 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	NPY1R	P25929	384 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	ATP5I	P56385	69 aa	Predicted RBP	7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	RPP30	P78346	268 aa	Known RBP	7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	KLF9	Q13886	244 aa	Predicted RBP	7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	RBMS2	Q15434	407 aa	Known RBP	7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	C2orf83	Q53S99	150 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782		Q6ZRM9	215 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	CENPS	Q8N2Z9	138 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	OR4X1	Q8NH49	305 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	LHFPL5	Q8TAF8	219 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782		Q8WTZ3	238 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	UBQLN2	Q9UHD9	624 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	PFDN2	Q9UHV9	154 aa		7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	PUS1	Q9Y606	427 aa	Known RBP eCLIP	7.77	□□□□□ -1.17
UBR1-207	ENST00000568782	IGKV3-7	A0A075B6H7	116 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	IGHV3-49	A0A0A0MS15	119 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	RBMY1B	A6NDE4	496 aa	Known RBP	7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	RBMY1E	A6NEQ0	496 aa	Known RBP	7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	IFNA4	P05014	189 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	RBMY1D	P0C7P1	496 aa	Known RBP	7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	TFPI2	P48307	235 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	RAB11A	P62491	216 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	TNFRSF9	Q07011	255 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	AARD	Q4LEZ3	155 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	TOMM20L	Q6UXN7	152 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	LINC00322	Q6ZN03	302 aa	Predicted RBP	7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	TCF24	Q7RTU0	167 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	LYZL2	Q7Z4W2	148 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	CCDC190	Q86UF4	302 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	STPG3	Q8N7X2	389 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	OR1S2	Q8NGQ3	325 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	DTD1	Q8TEA8	209 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	RNF2	Q99496	336 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	FAM110A	Q9BQ89	295 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	WFDC10A	Q9H1F0	79 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782		V9GYH0	126 aa		7.76	□□□□□ -1.17
UBR1-207	ENST00000568782	IGHV3OR16-13	A0A075B7E8	117 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	IGHV3-74	A0A0B4J1X5	117 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	UBE2C	O00762	179 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	FABP1	P07148	127 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	ZNF79	Q15937	498 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	BSX	Q3C1V8	233 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	NMS	Q5H8A3	153 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	PVRIG	Q6DKI7	326 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	TRIM63	Q969Q1	353 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	CIB3	Q96Q77	187 aa	Predicted RBP	7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	PAIP2B	Q9ULR5	123 aa	Known RBP	7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	TMED3	Q9Y3Q3	217 aa		7.75	□□□□□ -1.17
UBR1-207	ENST00000568782	IFNA21	P01568	189 aa		7.74	□□□□□ -1.17
UBR1-207	ENST00000568782	OR10J1	P30954	320 aa		7.74	□□□□□ -1.17
UBR1-207	ENST00000568782	RND2	P52198	227 aa		7.74	□□□□□ -1.17
UBR1-207	ENST00000568782	AP2S1	P53680	142 aa	Predicted RBP	7.74	□□□□□ -1.17
UBR1-207	ENST00000568782	UBE2M	P61081	183 aa	Known RBP	7.74	□□□□□ -1.17
UBR1-207	ENST00000568782	SUPT4H1	P63272	117 aa	Known RBP	7.74	□□□□□ -1.17

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