RNA–Protein interactions for RNA: ENST00000566472.1

CLN3-223, Transcript of CLN3, battenin, humanhuman

TSL 4

Gene CLN3, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-223ENST00000566472 DSCAMO60469 2012 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 OOSP1A8MZH6 123 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 TEX22C9J3V5 150 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 PEX7O00628 323 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 SIAH2O43255 324 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 IGLV2-8P01709 118 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 ESDP10768 282 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 GATA2P23769 480 aaPredicted RBP5.01□□□□□ -1.61
CLN3-223ENST00000566472 COL8A2P25067 703 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 CEACAM3P40198 252 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 MYCNOSP40205 109 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 ERVFC1-1P60608 527 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 PKIAP61925 76 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 SUMO1P63165 101 aaKnown RBP5.01□□□□□ -1.61
CLN3-223ENST00000566472 CX3CL1P78423 397 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 ADORA2A-AS1P86434 159 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 MLANAQ16655 118 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 CLEC12BQ2HXU8 276 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 PDZD11Q5EBL8 140 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 TPTE2P1Q5T6R2 138 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 C11orf71Q6IPW1 123 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 RASL11AQ6T310 242 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 PATE2Q6UY27 113 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 ZNF329Q86UD4 541 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 PPP1R27Q86WC6 154 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 GBGT1Q8N5D6 347 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 FXYD5Q96DB9 178 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 RBM14Q96PK6 669 aaKnown RBP5.01□□□□□ -1.61
CLN3-223ENST00000566472 PRDM13Q9H4Q3 707 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 TPSG1Q9NRR2 321 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 AURKAIP1Q9NWT8 199 aaPredicted RBP5.01□□□□□ -1.61
CLN3-223ENST00000566472 TMEM14CQ9P0S9 112 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 FAM186AA6NE01 2351 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 USF3Q68DE3 2245 aa5.01□□□□□ -1.61
CLN3-223ENST00000566472 IGHV3-72A0A0B4J1Y9 119 aa5□□□□□ -1.61
CLN3-223ENST00000566472 TRBV6-1A0A0K0K1D8 114 aa5□□□□□ -1.61
CLN3-223ENST00000566472 SMIM27A0A1W2PRY6 76 aa5□□□□□ -1.61
CLN3-223ENST00000566472 ODF3BA8MYP8 253 aa5□□□□□ -1.61
CLN3-223ENST00000566472 TSTD3H0UI37 97 aa5□□□□□ -1.61
CLN3-223ENST00000566472 GATCO43716 136 aaKnown RBP5□□□□□ -1.61
CLN3-223ENST00000566472 HYPMO75409 117 aa5□□□□□ -1.61
CLN3-223ENST00000566472 NDUFA3O95167 84 aa5□□□□□ -1.61
CLN3-223ENST00000566472 HLA-DQA1P01909 254 aa5□□□□□ -1.61
CLN3-223ENST00000566472 SFTPCP11686 197 aa5□□□□□ -1.61
CLN3-223ENST00000566472 PRTN3P24158 256 aa5□□□□□ -1.61
CLN3-223ENST00000566472 COX7A1P24310 79 aa5□□□□□ -1.61
CLN3-223ENST00000566472 HTR1DP28221 377 aa5□□□□□ -1.61
CLN3-223ENST00000566472 ADMP35318 185 aa5□□□□□ -1.61
CLN3-223ENST00000566472 MFAP2P55001 183 aa5□□□□□ -1.61
CLN3-223ENST00000566472 PAFAH1B2P68402 229 aa5□□□□□ -1.61
CLN3-223ENST00000566472 SSBP2P81877 361 aaPredicted RBP5□□□□□ -1.61
CLN3-223ENST00000566472 Q0VG73 95 aa5□□□□□ -1.61
CLN3-223ENST00000566472 TMEM183BQ1AE95 376 aa5□□□□□ -1.61
CLN3-223ENST00000566472 IBA57Q5T440 356 aaKnown RBP5□□□□□ -1.61
CLN3-223ENST00000566472 C1orf122Q6ZSJ8 110 aa5□□□□□ -1.61
CLN3-223ENST00000566472 LINC00305Q7Z4B0 112 aa5□□□□□ -1.61
CLN3-223ENST00000566472 S100A7AQ86SG5 101 aa5□□□□□ -1.61
CLN3-223ENST00000566472 DTX2Q86UW9 622 aa5□□□□□ -1.61
CLN3-223ENST00000566472 NPBQ8NG41 125 aa5□□□□□ -1.61
CLN3-223ENST00000566472 WIPF2Q8TF74 440 aaPredicted RBP5□□□□□ -1.61
CLN3-223ENST00000566472 SRSF12Q8WXF0 261 aaKnown RBP5□□□□□ -1.61
CLN3-223ENST00000566472 MISP3Q96FF7 219 aa5□□□□□ -1.61
CLN3-223ENST00000566472 GRAMD2BQ96HH9 432 aa5□□□□□ -1.61
CLN3-223ENST00000566472 RITA1Q96K30 269 aa5□□□□□ -1.61
CLN3-223ENST00000566472 COL25A1Q9BXS0 654 aaPredicted RBP5□□□□□ -1.61
CLN3-223ENST00000566472 MRPL18Q9H0U6 180 aaKnown RBP5□□□□□ -1.61
CLN3-223ENST00000566472 MRPL36Q9P0J6 103 aaKnown RBP5□□□□□ -1.61
CLN3-223ENST00000566472 DPM3Q9P2X0 92 aa5□□□□□ -1.61
CLN3-223ENST00000566472 RAXQ9Y2V3 346 aa5□□□□□ -1.61
CLN3-223ENST00000566472 HEATR1Q9H583 2144 aaKnown RBP4.99□□□□□ -1.61
CLN3-223ENST00000566472 TRAV5A0A0B4J249 113 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 IZUMO1RA6ND01 250 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 SNURFLB1AK76 121 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 C22orf46C9J442 243 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 I3L2K1 104 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 SLC17A3O00476 420 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 NBR2O15453 112 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 MOSP00540 346 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 AMY1AP04745 511 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 REG1AP05451 166 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 IGLC1P0CG04 106 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 PYYP10082 97 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 GZMBP10144 247 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 GP9P14770 177 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 PAX1P15863 534 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 HNF1AP20823 631 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 GPR6P46095 362 aaPredicted RBP4.99□□□□□ -1.61
CLN3-223ENST00000566472 TPPP2P59282 170 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 RANP62826 216 aaKnown RBP4.99□□□□□ -1.61
CLN3-223ENST00000566472 NHLH1Q02575 133 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 IQCJQ1A5X6 159 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 CT83Q5H943 113 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 OR10J3Q5JRS4 329 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 MINOS1Q5TGZ0 78 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 MORN5Q5VZ52 161 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 HCP5Q6MZN7 132 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 CCDC144NLQ6NUI1 221 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 C5orf17Q8NAS9 161 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 CMTM2Q8TAZ6 248 aa4.99□□□□□ -1.61
CLN3-223ENST00000566472 CFHR4Q92496 578 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms