RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TMEM56-RWDD3S4R434 201 aa10.87□□□□□ -0.67
FANCA-220ENST00000566409 TRAV14DV4A0A0A6YYC5 116 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 A0A1B0GU03 582 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 FABP12A6NFH5 140 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 NPBWR1P48145 328 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 HOXA1P49639 335 aaPredicted RBP10.86□□□□□ -0.67
FANCA-220ENST00000566409 SPCS3P61009 180 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 DHODHQ02127 395 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 TMEM268Q5VZI3 342 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 FAM219AQ8IW50 185 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 DUSP18Q8NEJ0 188 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 OR52E5Q8NH55 327 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 PDCD10Q9BUL8 212 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.86□□□□□ -0.67
FANCA-220ENST00000566409 CACNG5Q9UF02 275 aa10.86□□□□□ -0.67
FANCA-220ENST00000566409 PLECQ15149 4684 aaKnown RBP10.85□□□□□ -0.67
FANCA-220ENST00000566409 SUB1P53999 127 aaKnown RBP eCLIP10.85□□□□□ -0.67
FANCA-220ENST00000566409 SUPT4H1P63272 117 aaKnown RBP10.85□□□□□ -0.67
FANCA-220ENST00000566409 TMEM187Q14656 261 aa10.85□□□□□ -0.67
FANCA-220ENST00000566409 ZNF124Q15973 351 aa10.85□□□□□ -0.67
FANCA-220ENST00000566409 RNASE11Q8TAA1 199 aaKnown RBP10.85□□□□□ -0.67
FANCA-220ENST00000566409 TMEM170AQ8WVE7 144 aa10.85□□□□□ -0.67
FANCA-220ENST00000566409 ST8SIA2Q92186 375 aa10.85□□□□□ -0.67
FANCA-220ENST00000566409 GALNT14Q96FL9 552 aa10.85□□□□□ -0.67
FANCA-220ENST00000566409 PUS1Q9Y606 427 aaKnown RBP eCLIP10.85□□□□□ -0.67
FANCA-220ENST00000566409 OR4C46A6NHA9 309 aa10.84□□□□□ -0.67
FANCA-220ENST00000566409 NOL3O60936 208 aaKnown RBP10.84□□□□□ -0.67
FANCA-220ENST00000566409 KLF9Q13886 244 aaPredicted RBP10.84□□□□□ -0.67
FANCA-220ENST00000566409 ZNF600Q6ZNG1 722 aa10.84□□□□□ -0.67
FANCA-220ENST00000566409 APRG1Q8IVJ8 170 aa10.84□□□□□ -0.67
FANCA-220ENST00000566409 OR4X1Q8NH49 305 aa10.84□□□□□ -0.67
FANCA-220ENST00000566409 TRIM63Q969Q1 353 aa10.84□□□□□ -0.67
FANCA-220ENST00000566409 VSIRQ9H7M9 311 aa10.84□□□□□ -0.67
FANCA-220ENST00000566409 ENY2Q9NPA8 101 aa10.84□□□□□ -0.67
FANCA-220ENST00000566409 MCUBQ9NWR8 336 aa10.84□□□□□ -0.67
FANCA-220ENST00000566409 V9GYH0 126 aa10.84□□□□□ -0.67
FANCA-220ENST00000566409 IGKV3-7A0A075B6H7 116 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 IGHV3-66A0A0C4DH42 116 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 LCE6AA0A183 80 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 CORTO00230 105 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 CLN5O75503 358 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 IGKV1-17P01599 117 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 TFPI2P48307 235 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 GBGT1Q8N5D6 347 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 RBM38Q9H0Z9 239 aaKnown RBP10.83□□□□□ -0.68
FANCA-220ENST00000566409 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
FANCA-220ENST00000566409 SCP2D1Q9UJQ7 156 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 AGRNO00468 2067 aa10.83□□□□□ -0.68
FANCA-220ENST00000566409 DFFBO76075 338 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 NXPH3O95157 252 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 AKR1C4P17516 323 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 RPL35AP18077 110 aaKnown RBP10.82□□□□□ -0.68
FANCA-220ENST00000566409 OPRK1P41145 380 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 HTR2BP41595 481 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 ZNF79Q15937 498 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 C2orf83Q53S99 150 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 NMSQ5H8A3 153 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 TCF24Q7RTU0 167 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 LYZL2Q7Z4W2 148 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 IL22RA2Q969J5 263 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 HYDINQ4G0P3 5121 aa10.82□□□□□ -0.68
FANCA-220ENST00000566409 ALMS1Q8TCU4 4167 aa10.81□□□□□ -0.68
FANCA-220ENST00000566409 EWSR1Q01844 656 aaKnown RBP eCLIP10.81□□□□□ -0.68
FANCA-220ENST00000566409 DEFB135Q30KP9 77 aa10.81□□□□□ -0.68
FANCA-220ENST00000566409 TIGITQ495A1 244 aa10.81□□□□□ -0.68
FANCA-220ENST00000566409 PRSS54Q6PEW0 395 aa10.81□□□□□ -0.68
FANCA-220ENST00000566409 Q6ZWC4 215 aa10.81□□□□□ -0.68
FANCA-220ENST00000566409 GINS3Q9BRX5 216 aa10.81□□□□□ -0.68
FANCA-220ENST00000566409 KCNIP3Q9Y2W7 256 aa10.81□□□□□ -0.68
FANCA-220ENST00000566409 A0A0B4J2A0 478 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 KIR2DL5BA0A0G2JN68 375 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 KIR2DL5BA0A0G2JPC4 375 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 CEBPZOSA8MTT3 80 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 SPRY2O43597 315 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 SULT1A3P0DMM9 295 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 SULT1A4P0DMN0 295 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 CRYBB3P26998 211 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 APOC4P55056 127 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 PYDC2Q56P42 97 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 CCDC190Q86UF4 302 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 WFDC3Q8IUB2 231 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 KIR2DL5AQ8N109 375 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 FAM24BQ8N5W8 94 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 SLC24A4Q8NFF2 622 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 KIR2DL5BQ8NHK3 375 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 SCGB3A2Q96PL1 93 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 MS4A6AQ9H2W1 248 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 MAP6D1Q9H9H5 199 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 SHPKQ9UHJ6 478 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 TP53TG1Q9Y2A0 90 aa10.8□□□□□ -0.68
FANCA-220ENST00000566409 UBE2CO00762 179 aa10.79□□□□□ -0.68
FANCA-220ENST00000566409 IGLC1P0CG04 106 aa10.79□□□□□ -0.68
FANCA-220ENST00000566409 TNFRSF9Q07011 255 aa10.79□□□□□ -0.68
FANCA-220ENST00000566409 IL17DQ8TAD2 202 aa10.79□□□□□ -0.68
FANCA-220ENST00000566409 RNASEH2CQ8TDP1 164 aaKnown RBP10.79□□□□□ -0.68
FANCA-220ENST00000566409 RNF183Q96D59 192 aa10.79□□□□□ -0.68
FANCA-220ENST00000566409 HSPB7Q9UBY9 170 aa10.79□□□□□ -0.68
FANCA-220ENST00000566409 A0A0J9YWU9 116 aa10.78□□□□□ -0.68
FANCA-220ENST00000566409 CCDC160A6NGH7 325 aa10.78□□□□□ -0.68
FANCA-220ENST00000566409 NPPCP23582 126 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms