RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 EWSR1Q01844 656 aaKnown RBP eCLIP11.56□□□□□ -0.56
CDH3-204ENST00000565453 TNFRSF9Q07011 255 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 ZNF124Q15973 351 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 ZNF600Q6ZNG1 722 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 APRG1Q8IVJ8 170 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 FAM219AQ8IW50 185 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 SELENOHQ8IZQ5 122 aaKnown RBP11.56□□□□□ -0.56
CDH3-204ENST00000565453 OR52E5Q8NH55 327 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 RAB2BQ8WUD1 216 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 ST8SIA2Q92186 375 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 RNF183Q96D59 192 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 DIRAS2Q96HU8 199 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 BCL7BQ9BQE9 202 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 GINS3Q9BRX5 216 aa11.56□□□□□ -0.56
CDH3-204ENST00000565453 C14orf166Q9Y224 244 aaKnown RBP11.56□□□□□ -0.56
CDH3-204ENST00000565453 PUS1Q9Y606 427 aaKnown RBP eCLIP11.56□□□□□ -0.56
CDH3-204ENST00000565453 A0A0J9YWU9 116 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 CRYM-AS1A6NIL9 109 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 JTBO76095 146 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 TFPI2P48307 235 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 SUB1P53999 127 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDH3-204ENST00000565453 TMBIM6P55061 237 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 SPCS3P61009 180 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 IL18Q14116 193 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 MLANAQ16655 118 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 TCF24Q7RTU0 167 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 STPG3Q8N7X2 389 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 RNASE11Q8TAA1 199 aaKnown RBP11.55□□□□□ -0.56
CDH3-204ENST00000565453 RBPMSQ93062 196 aaKnown RBP11.55□□□□□ -0.56
CDH3-204ENST00000565453 RABL2AQ9UBK7 228 aaPredicted RBP11.55□□□□□ -0.56
CDH3-204ENST00000565453 RABL2BQ9UNT1 228 aa11.55□□□□□ -0.56
CDH3-204ENST00000565453 IGKV3-7A0A075B6H7 116 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 ANKRD20A5PA0PJZ0 165 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 GSTZ1O43708 216 aaPredicted RBP11.54□□□□□ -0.56
CDH3-204ENST00000565453 CLN5O75503 358 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 CMC4P56277 68 aaPredicted RBP11.54□□□□□ -0.56
CDH3-204ENST00000565453 DHODHQ02127 395 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 LYG2Q86SG7 212 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 GBGT1Q8N5D6 347 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 OR4X1Q8NH49 305 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 GPR146Q96CH1 333 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 SOSTQ9BQB4 213 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 ENY2Q9NPA8 101 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.54□□□□□ -0.56
CDH3-204ENST00000565453 TMEM56-RWDD3S4R434 201 aa11.54□□□□□ -0.56
CDH3-204ENST00000565453 ALMS1Q8TCU4 4167 aa11.53□□□□□ -0.56
CDH3-204ENST00000565453 CD5P06127 495 aa11.53□□□□□ -0.56
CDH3-204ENST00000565453 OPRK1P41145 380 aa11.53□□□□□ -0.56
CDH3-204ENST00000565453 OR51S1Q8NGJ8 323 aa11.53□□□□□ -0.56
CDH3-204ENST00000565453 TMEM230Q96A57 120 aa11.53□□□□□ -0.56
CDH3-204ENST00000565453 PRRT1Q99946 306 aa11.53□□□□□ -0.56
CDH3-204ENST00000565453 SLIRPQ9GZT3 109 aaKnown RBP11.53□□□□□ -0.56
CDH3-204ENST00000565453 CACNG5Q9UF02 275 aa11.53□□□□□ -0.56
CDH3-204ENST00000565453 TRAV2A0A0B4J234 112 aa11.52□□□□□ -0.57
CDH3-204ENST00000565453 IGHV3-66A0A0C4DH42 116 aa11.52□□□□□ -0.57
CDH3-204ENST00000565453 DFFBO76075 338 aa11.52□□□□□ -0.57
CDH3-204ENST00000565453 IGKV1-17P01599 117 aa11.52□□□□□ -0.57
CDH3-204ENST00000565453 ATF4P18848 351 aaPredicted RBP11.52□□□□□ -0.57
CDH3-204ENST00000565453 C2orf83Q53S99 150 aa11.52□□□□□ -0.57
CDH3-204ENST00000565453 TMEM268Q5VZI3 342 aa11.52□□□□□ -0.57
CDH3-204ENST00000565453 TMEM170AQ8WVE7 144 aa11.52□□□□□ -0.57
CDH3-204ENST00000565453 C6orf62Q9GZU0 229 aaPredicted RBP11.52□□□□□ -0.57
CDH3-204ENST00000565453 MS4A6AQ9H2W1 248 aa11.52□□□□□ -0.57
CDH3-204ENST00000565453 HYDINQ4G0P3 5121 aa11.52□□□□□ -0.57
CDH3-204ENST00000565453 PLECQ15149 4684 aaKnown RBP11.51□□□□□ -0.57
CDH3-204ENST00000565453 H3BMQ9 156 aa11.51□□□□□ -0.57
CDH3-204ENST00000565453 CRYBB3P26998 211 aa11.51□□□□□ -0.57
CDH3-204ENST00000565453 HTR2BP41595 481 aa11.51□□□□□ -0.57
CDH3-204ENST00000565453 PAFAH1B2P68402 229 aa11.51□□□□□ -0.57
CDH3-204ENST00000565453 TMEM187Q14656 261 aa11.51□□□□□ -0.57
CDH3-204ENST00000565453 TIGITQ495A1 244 aa11.51□□□□□ -0.57
CDH3-204ENST00000565453 FAM24BQ8N5W8 94 aa11.51□□□□□ -0.57
CDH3-204ENST00000565453 IL22RA2Q969J5 263 aa11.51□□□□□ -0.57
CDH3-204ENST00000565453 CSTL1Q9H114 145 aa11.51□□□□□ -0.57
CDH3-204ENST00000565453 RSL24D1Q9UHA3 163 aaKnown RBP11.51□□□□□ -0.57
CDH3-204ENST00000565453 NPPCP23582 126 aa11.5□□□□□ -0.57
CDH3-204ENST00000565453 TNFSF8P32971 234 aa11.5□□□□□ -0.57
CDH3-204ENST00000565453 PMS2P11Q13670 270 aa11.5□□□□□ -0.57
CDH3-204ENST00000565453 TMEM231Q9H6L2 316 aa11.5□□□□□ -0.57
CDH3-204ENST00000565453 HEYLQ9NQ87 328 aaPredicted RBP11.5□□□□□ -0.57
CDH3-204ENST00000565453 PRR13Q9NZ81 148 aa11.5□□□□□ -0.57
CDH3-204ENST00000565453 TRAV30A0A087WSZ9 112 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 RPS10-NUDT3A0A1W2PQS6 291 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 MPTX1A8MV57 137 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 IGLC1P0CG04 106 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 DEFB131AP59861 70 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 SUPT4H1P63272 117 aaKnown RBP11.49□□□□□ -0.57
CDH3-204ENST00000565453 NMSQ5H8A3 153 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 SLC24A4Q8NFF2 622 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 RNASEH2CQ8TDP1 164 aaKnown RBP11.49□□□□□ -0.57
CDH3-204ENST00000565453 METTL26Q96S19 204 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 SCP2D1Q9UJQ7 156 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 U3KQE9 123 aa11.49□□□□□ -0.57
CDH3-204ENST00000565453 A0A1W2PS18 150 aa11.48□□□□□ -0.57
CDH3-204ENST00000565453 CXorf65A6NEN9 183 aa11.48□□□□□ -0.57
CDH3-204ENST00000565453 CEBPZOSA8MTT3 80 aa11.48□□□□□ -0.57
CDH3-204ENST00000565453 DNASE2O00115 360 aaPredicted RBP11.48□□□□□ -0.57
CDH3-204ENST00000565453 SULT1A3P0DMM9 295 aa11.48□□□□□ -0.57
CDH3-204ENST00000565453 SULT1A4P0DMN0 295 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms