RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ID3Q02535 119 aa12.23□□□□□ -0.45
RAB40C-208ENST00000564703 RELQ04864 619 aaPredicted RBP12.23□□□□□ -0.45
RAB40C-208ENST00000564703 BEAN1Q3B7T3 259 aa12.23□□□□□ -0.45
RAB40C-208ENST00000564703 PVRIGQ6DKI7 326 aa12.23□□□□□ -0.45
RAB40C-208ENST00000564703 GSG1LQ6UXU4 331 aa12.23□□□□□ -0.45
RAB40C-208ENST00000564703 OR10C1Q96KK4 312 aa12.23□□□□□ -0.45
RAB40C-208ENST00000564703 LGALS9O00182 355 aa12.22□□□□□ -0.45
RAB40C-208ENST00000564703 SLC25A4P12235 298 aa12.22□□□□□ -0.45
RAB40C-208ENST00000564703 FCGR2BP31994 310 aaPredicted RBP12.22□□□□□ -0.45
RAB40C-208ENST00000564703 ZBTB8BQ8NAP8 495 aaPredicted RBP12.22□□□□□ -0.45
RAB40C-208ENST00000564703 NBEAL1Q6ZS30 2694 aa12.22□□□□□ -0.45
RAB40C-208ENST00000564703 TRAV30A0A087WSZ9 112 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 IGHV3-35A0A0C4DH35 117 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 CCSO14618 274 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 PTTG1O95997 202 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 CTSGP08311 255 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 DCTN2Q13561 401 aaKnown RBP12.21□□□□□ -0.45
RAB40C-208ENST00000564703 MLANAQ16655 118 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 SPANXN5Q5MJ07 72 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 KPRPQ5T749 579 aaPredicted RBP12.21□□□□□ -0.45
RAB40C-208ENST00000564703 OR4D5Q8NGN0 318 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 C2orf50Q96LR7 162 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 UFC1Q9Y3C8 167 aa12.21□□□□□ -0.45
RAB40C-208ENST00000564703 NDUFA4O00483 81 aa12.2□□□□□ -0.46
RAB40C-208ENST00000564703 WIPF1O43516 503 aa12.2□□□□□ -0.46
RAB40C-208ENST00000564703 YIF1AO95070 293 aa12.2□□□□□ -0.46
RAB40C-208ENST00000564703 TMEM50AO95807 157 aa12.2□□□□□ -0.46
RAB40C-208ENST00000564703 POLR2GP62487 172 aaKnown RBP eCLIP12.2□□□□□ -0.46
RAB40C-208ENST00000564703 REC114Q7Z4M0 266 aa12.2□□□□□ -0.46
RAB40C-208ENST00000564703 OR4X1Q8NH49 305 aa12.2□□□□□ -0.46
RAB40C-208ENST00000564703 RAB40CQ96S21 281 aa12.2□□□□□ -0.46
RAB40C-208ENST00000564703 CHRDL1Q9BU40 450 aa12.2□□□□□ -0.46
RAB40C-208ENST00000564703 FNDC4Q9H6D8 234 aaPredicted RBP12.2□□□□□ -0.46
RAB40C-208ENST00000564703 PSENENQ9NZ42 101 aa12.2□□□□□ -0.46
RAB40C-208ENST00000564703 STRAPQ9Y3F4 350 aaKnown RBP12.2□□□□□ -0.46
RAB40C-208ENST00000564703 L7N2F9 121 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 SSNA1O43805 119 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 CLN5O75503 358 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 CSN3P07498 182 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 GPX4P36969 197 aaPredicted RBP12.19□□□□□ -0.46
RAB40C-208ENST00000564703 VAMP2P63027 116 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 EGFEM1PQ0D2K5 195 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 C11orf87Q6NUJ2 197 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 DYNLRB2Q8TF09 96 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 CACNG8Q8WXS5 425 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 SMIM8Q96KF7 97 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 C20orf24Q9BUV8 137 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 ZNF436Q9C0F3 470 aaPredicted RBP12.19□□□□□ -0.46
RAB40C-208ENST00000564703 SIGLEC8Q9NYZ4 499 aa12.19□□□□□ -0.46
RAB40C-208ENST00000564703 F8W735 103 aaPredicted RBP12.18□□□□□ -0.46
RAB40C-208ENST00000564703 SSSCA1O60232 199 aa12.18□□□□□ -0.46
RAB40C-208ENST00000564703 ADMP35318 185 aa12.18□□□□□ -0.46
RAB40C-208ENST00000564703 ELLP55199 621 aaPredicted RBP12.18□□□□□ -0.46
RAB40C-208ENST00000564703 CD69Q07108 199 aa12.18□□□□□ -0.46
RAB40C-208ENST00000564703 TMEM170AQ8WVE7 144 aa12.18□□□□□ -0.46
RAB40C-208ENST00000564703 NOTCH1P46531 2555 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 MBPP02686 304 aaPredicted RBP12.17□□□□□ -0.46
RAB40C-208ENST00000564703 FOLR2P14207 255 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 SPNP16150 400 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 PVALBP20472 110 aaPredicted RBP12.17□□□□□ -0.46
RAB40C-208ENST00000564703 CBLN1P23435 193 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 RND2P52198 227 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 TAS2R30P59541 319 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 CYCSP99999 105 aaKnown RBP12.17□□□□□ -0.46
RAB40C-208ENST00000564703 RGS21Q2M5E4 152 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 PRSS54Q6PEW0 395 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 IL34Q6ZMJ4 242 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 TMEM116Q8NCL8 245 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 NPIPB3Q92617 1050 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 MARC2Q969Z3 335 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 ACY3Q96HD9 319 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
RAB40C-208ENST00000564703 LSM5Q9Y4Y9 91 aaKnown RBP12.17□□□□□ -0.46
RAB40C-208ENST00000564703 FBN3Q75N90 2809 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 H3BP45 60 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 K7EMT4 169 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 GOSR2O14653 212 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 IGLV1-51P01701 117 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 PRB2P02812 416 aaPredicted RBP12.16□□□□□ -0.46
RAB40C-208ENST00000564703 KRTAP10-11P60412 298 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 TM4SF20Q53R12 229 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 UNQ9165/PRO28630Q6UXU0 137 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 ZNF600Q6ZNG1 722 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 SLC16A13Q7RTY0 426 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 Q8WTZ3 238 aa12.16□□□□□ -0.46
RAB40C-208ENST00000564703 DAZ1Q9NQZ3 744 aaKnown RBP12.16□□□□□ -0.46
RAB40C-208ENST00000564703 TECRQ9NZ01 308 aaKnown RBP12.16□□□□□ -0.46
RAB40C-208ENST00000564703 MRPL27Q9P0M9 148 aaKnown RBP12.16□□□□□ -0.46
RAB40C-208ENST00000564703 ZNF256Q9Y2P7 627 aaPredicted RBP12.16□□□□□ -0.46
RAB40C-208ENST00000564703 SORL1Q92673 2214 aa12.15□□□□□ -0.46
RAB40C-208ENST00000564703 A8MWP6 167 aa12.15□□□□□ -0.46
RAB40C-208ENST00000564703 RLN2P04090 185 aa12.15□□□□□ -0.46
RAB40C-208ENST00000564703 OR10J1P30954 320 aa12.15□□□□□ -0.46
RAB40C-208ENST00000564703 S100A10P60903 97 aa12.15□□□□□ -0.46
RAB40C-208ENST00000564703 OR1S2Q8NGQ3 325 aa12.15□□□□□ -0.46
RAB40C-208ENST00000564703 TMEM190Q8WZ59 177 aa12.15□□□□□ -0.46
RAB40C-208ENST00000564703 GINS3Q9BRX5 216 aa12.15□□□□□ -0.46
RAB40C-208ENST00000564703 MRPL36Q9P0J6 103 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms