RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TRBV20OR9-2A0A075B6H5 130 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 TRBV6-1A0A0K0K1D8 114 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 K7EN84 100 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 SLC25A5P05141 298 aaKnown RBP6.2□□□□□ -1.42
ATXN3-249ENST00000564606 HBBP68871 147 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM136Q6ZRR5 245 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 DOLPP1Q86YN1 238 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM116Q8NCL8 245 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 C8orf46Q8TAG6 207 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 PLPPR2Q96GM1 343 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 MRPL20Q9BYC9 149 aaKnown RBP6.2□□□□□ -1.42
ATXN3-249ENST00000564606 TNFRSF19Q9NS68 423 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 ZNF355PQ9NSJ1 428 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM14CQ9P0S9 112 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 EPDR1Q9UM22 224 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 FAM215AQ9Y5M1 114 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 MED12LQ86YW9 2145 aa6.2□□□□□ -1.42
ATXN3-249ENST00000564606 A0A0C4DFX4 3053 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 AHCTF1Q8WYP5 2266 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 ESPL1Q14674 2120 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 A0A1B0GV90 55 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 DPRXA6NFQ7 191 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 SLC17A3O00476 420 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 FOXH1O75593 365 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 OR2J3O76001 311 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 TOMM40O96008 361 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 P01737 135 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 NBEAP1P0C6P0 100 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 LINC00614P0C842 121 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 SRIP30626 198 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 CHRNB4P30926 498 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 APOBEC3AP31941 199 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-249ENST00000564606 MFAP2P55001 183 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 KRTDAPP60985 99 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 SPATA31B1PQ5VZV4 182 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 SEM1Q6ZVN7 128 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 LINC00305Q7Z4B0 112 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM256Q8N2U0 113 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 FAM216BQ8N7L0 139 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 OR4F17Q8NGA8 305 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 OR2D3Q8NGH3 330 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 NPIPB3Q92617 1050 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 TIMD4Q96H15 378 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 IGF2BP2-AS1Q96M15 143 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 TXN2Q99757 166 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 SCNM1Q9BWG6 230 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 SLC25A2Q9BXI2 301 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 RAB1BQ9H0U4 201 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM133Q9H2Q1 129 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 NRN1Q9NPD7 142 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 OTORQ9NRC9 128 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 THYN1Q9P016 225 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 RALYQ9UKM9 306 aaKnown RBP6.19□□□□□ -1.42
ATXN3-249ENST00000564606 HIGD1AQ9Y241 93 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 ZFP30Q9Y2G7 519 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 KLF12Q9Y4X4 402 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 INSIG2Q9Y5U4 225 aa6.19□□□□□ -1.42
ATXN3-249ENST00000564606 SPAARA0A1B0GVQ0 90 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 GRIFINA4D1Z8 144 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 PGPEP1LA6NFU8 196 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 GGTLC3B5MD39 225 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 CHEK1O14757 476 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 ENSAO43768 121 aaKnown RBP6.18□□□□□ -1.42
ATXN3-249ENST00000564606 IGHV3-7P01780 117 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 IGKV1-16P04430 117 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 CD3EP07766 207 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 IGHV1-8P0DP01 117 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 SELLP14151 372 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 BTF3P20290 206 aaKnown RBP6.18□□□□□ -1.42
ATXN3-249ENST00000564606 HNF1AP20823 631 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 CSN1S1P47710 185 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 TDGF1P3P51864 188 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
ATXN3-249ENST00000564606 LINC00205P59089 165 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 CCL8P80075 99 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 RIGQ13278 110 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 ADIPOQQ15848 244 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM155Q4W5P6 130 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 TPTE2P1Q5T6R2 138 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM200BQ69YZ2 307 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 PVRIGQ6DKI7 326 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 GFRALQ6UXV0 394 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 RBPMS2Q6ZRY4 209 aaKnown RBP6.18□□□□□ -1.42
ATXN3-249ENST00000564606 ZNF329Q86UD4 541 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 BPIFA4PQ86YQ2 179 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 VN1R17PQ8TDU5 208 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 RND1Q92730 232 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 MISP3Q96FF7 219 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 RASL11BQ9BPW5 248 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 PMCHL2Q9BQD1 86 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 CLEC7AQ9BXN2 247 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 RPP21Q9H633 154 aaKnown RBP6.18□□□□□ -1.42
ATXN3-249ENST00000564606 GNB4Q9HAV0 340 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 AURKAIP1Q9NWT8 199 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-249ENST00000564606 C1RLQ9NZP8 487 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 HSPB8Q9UJY1 196 aa6.18□□□□□ -1.42
ATXN3-249ENST00000564606 KIAA2026Q5HYC2 2103 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 IGHV1-69-2A0A0G2JMI3 117 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 PGPA6NDG6 321 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms