RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 M0R1X1 148 aa14.38□□□□□ -0.11
GDE1-203ENST00000564172 RBFOX2O43251 390 aaKnown RBP eCLIP14.38□□□□□ -0.11
GDE1-203ENST00000564172 OR7C2O60412 319 aa14.38□□□□□ -0.11
GDE1-203ENST00000564172 SAA2P0DJI9 122 aaPredicted RBP14.38□□□□□ -0.11
GDE1-203ENST00000564172 TCTEX1D1Q8N7M0 179 aa14.38□□□□□ -0.11
GDE1-203ENST00000564172 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.38□□□□□ -0.11
GDE1-203ENST00000564172 ZNRD1Q9P1U0 126 aa14.38□□□□□ -0.11
GDE1-203ENST00000564172 H7BYZ3 331 aa14.38□□□□□ -0.11
GDE1-203ENST00000564172 TSPOP30536 169 aa14.38□□□□□ -0.11
GDE1-203ENST00000564172 CST9LP1Q5W188 147 aa14.38□□□□□ -0.11
GDE1-203ENST00000564172 RPL15P61313 204 aaKnown RBP14.37□□□□□ -0.11
GDE1-203ENST00000564172 Q6ZVH6 145 aa14.37□□□□□ -0.11
GDE1-203ENST00000564172 OR5AU1Q8NGC0 362 aa14.37□□□□□ -0.11
GDE1-203ENST00000564172 NRGNQ92686 78 aa14.37□□□□□ -0.11
GDE1-203ENST00000564172 USP9YO00507 2555 aaPredicted RBP14.37□□□□□ -0.11
GDE1-203ENST00000564172 A0A0G2JRQ6 117 aa14.37□□□□□ -0.11
GDE1-203ENST00000564172 NUPR1O60356 82 aa14.37□□□□□ -0.11
GDE1-203ENST00000564172 LIPFP07098 398 aa14.37□□□□□ -0.11
GDE1-203ENST00000564172 HINT1P49773 126 aaPredicted RBP14.37□□□□□ -0.11
GDE1-203ENST00000564172 ZNF816Q0VGE8 651 aaPredicted RBP14.37□□□□□ -0.11
GDE1-203ENST00000564172 CYP2G1PQ6ZSU1 146 aa14.37□□□□□ -0.11
GDE1-203ENST00000564172 GNPNAT1Q96EK6 184 aaPredicted RBP14.37□□□□□ -0.11
GDE1-203ENST00000564172 PXMP4Q9Y6I8 212 aa14.37□□□□□ -0.11
GDE1-203ENST00000564172 ATP6V0CP27449 155 aa14.36□□□□□ -0.11
GDE1-203ENST00000564172 ATP5J2P56134 94 aa14.36□□□□□ -0.11
GDE1-203ENST00000564172 C5orf64Q2M2E5 130 aa14.36□□□□□ -0.11
GDE1-203ENST00000564172 C8orf31Q8N9H6 132 aa14.36□□□□□ -0.11
GDE1-203ENST00000564172 LSM10Q969L4 123 aaKnown RBP14.36□□□□□ -0.11
GDE1-203ENST00000564172 SPIN2AQ99865 258 aa14.36□□□□□ -0.11
GDE1-203ENST00000564172 SPIN2BQ9BPZ2 258 aa14.36□□□□□ -0.11
GDE1-203ENST00000564172 TMEM133Q9H2Q1 129 aa14.36□□□□□ -0.11
GDE1-203ENST00000564172 ZNF586Q9NXT0 402 aa14.36□□□□□ -0.11
GDE1-203ENST00000564172 CRYBG3Q68DQ2 2970 aa14.36□□□□□ -0.11
GDE1-203ENST00000564172 SLC25A17O43808 307 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 IGKV1-5P01602 117 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 RBP4P02753 201 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 MMP9P14780 707 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 SLAQ13239 276 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 ABHD12Q8N2K0 398 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 LINC00311Q8N616 119 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 STXBP6Q8NFX7 210 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 MANBALQ9NQG1 85 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 J3KRW8 73 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 KCNIP4Q6PIL6 250 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 OR9G1Q8NH87 305 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 ZNF479Q96JC4 524 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 S1PR3Q99500 378 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 HSPB9Q9BQS6 159 aa14.35□□□□□ -0.11
GDE1-203ENST00000564172 S1PR2O95136 353 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 SCGB1D2O95969 90 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 BCL2P10415 239 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 IZUMO4Q1ZYL8 232 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 TMEM217Q8N7C4 229 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 DDB2Q92466 427 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 ARHGAP32A7KAX9 2087 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 FCGR3BO75015 233 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 ZFP36P26651 326 aaKnown RBP14.34□□□□□ -0.11
GDE1-203ENST00000564172 DLX1P56177 255 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 LMO4P61968 165 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 Q6ZRM9 215 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 Q8N976 141 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 FAM168AQ92567 244 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 ONECUT1Q9UBC0 465 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 MED13LQ71F56 2210 aa14.34□□□□□ -0.11
GDE1-203ENST00000564172 TACC2O95359 2948 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 KIAA1324LA8MWY0 1029 aaPredicted RBP14.33□□□□□ -0.12
GDE1-203ENST00000564172 KRASP01116 189 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 SLC25A6P12236 298 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 THBS3P49746 956 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 TAS2R30P59541 319 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 ZNF787Q6DD87 383 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 ZNF833PQ6ZTB9 187 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 OR10X1Q8NGY0 326 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 TRAPPC1Q9Y5R8 145 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 CD99P14209 185 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 Q8N7P7 452 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 ADTRPQ96IZ2 230 aa14.33□□□□□ -0.12
GDE1-203ENST00000564172 RCL1Q9Y2P8 373 aaKnown RBP14.33□□□□□ -0.12
GDE1-203ENST00000564172 ST8SIA3O43173 380 aa14.32□□□□□ -0.12
GDE1-203ENST00000564172 PITX3O75364 302 aa14.32□□□□□ -0.12
GDE1-203ENST00000564172 CT45A6P0DMU7 189 aa14.32□□□□□ -0.12
GDE1-203ENST00000564172 CT45A5P0DMU8 189 aa14.32□□□□□ -0.12
GDE1-203ENST00000564172 CT45A7P0DMV0 189 aa14.32□□□□□ -0.12
GDE1-203ENST00000564172 G6PCP35575 357 aa14.32□□□□□ -0.12
GDE1-203ENST00000564172 CXorf66Q5JRM2 361 aaPredicted RBP14.32□□□□□ -0.12
GDE1-203ENST00000564172 C10orf105Q8TEF2 133 aa14.32□□□□□ -0.12
GDE1-203ENST00000564172 PERPQ96FX8 193 aa14.32□□□□□ -0.12
GDE1-203ENST00000564172 PIMREGQ9BSJ6 248 aa14.32□□□□□ -0.12
GDE1-203ENST00000564172 DIRC3C9JPN6 131 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 CRYGCP07315 174 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 NKX2-1P43699 371 aaPredicted RBP14.31□□□□□ -0.12
GDE1-203ENST00000564172 CRYBA4P53673 196 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 ID3Q02535 119 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 PRB3Q04118 309 aaPredicted RBP14.31□□□□□ -0.12
GDE1-203ENST00000564172 TMEM144Q7Z5S9 345 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 FER1L6-AS1Q8NA97 138 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 ST6GALNAC6Q969X2 333 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 CACNG5Q9UF02 275 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 M0R1W7 72 aa14.31□□□□□ -0.12
GDE1-203ENST00000564172 P0C879 139 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms