RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ETV6P41212 452 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 P2RY1P47900 373 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 PPP5CP53041 499 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 TMEM41BQ5BJD5 291 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 MORN3Q6PF18 240 aaPredicted RBP9.45□□□□□ -0.9
SF3B3-202ENST00000562722 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 HRH4Q9H3N8 390 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
SF3B3-202ENST00000562722 PCLOQ9Y6V0 5065 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 VPS13DQ5THJ4 4388 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 A0A0B4J293 547 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 CLN5O75503 358 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 APOA1P02647 267 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 SPP1P10451 314 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 MIFP14174 115 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 PIGPP57054 158 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 RNASE10Q5GAN6 216 aaKnown RBP9.44□□□□□ -0.9
SF3B3-202ENST00000562722 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 TRPT1Q86TN4 253 aaKnown RBP9.44□□□□□ -0.9
SF3B3-202ENST00000562722 YIPF6Q96EC8 236 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 ZNF486Q96H40 463 aaPredicted RBP9.44□□□□□ -0.9
SF3B3-202ENST00000562722 TP53RKQ96S44 253 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 CLEC5AQ9NY25 188 aa9.44□□□□□ -0.9
SF3B3-202ENST00000562722 DNAH6Q9C0G6 4158 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 TRAV10A0A0B4J240 114 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 C3orf85A0A1B0GTC6 90 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 FAM25AB3EWG3 89 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 FAM25CB3EWG5 89 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 FAM25GB3EWG6 89 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 K7EQG2 157 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 HPGDSO60760 199 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 RBMY1A1P0DJD3 496 aaKnown RBP9.43□□□□□ -0.9
SF3B3-202ENST00000562722 RBMY1CP0DJD4 496 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 RNASE2P10153 161 aaKnown RBP9.43□□□□□ -0.9
SF3B3-202ENST00000562722 C4BPBP20851 252 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 EIF2B2P49770 351 aaKnown RBP9.43□□□□□ -0.9
SF3B3-202ENST00000562722 RND3P61587 244 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 DHRS2Q13268 280 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 RBMY1FQ15415 496 aaKnown RBP9.43□□□□□ -0.9
SF3B3-202ENST00000562722 TIGITQ495A1 244 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 Q6ZTC4 211 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 RRNAD1Q96FB5 475 aaKnown RBP9.43□□□□□ -0.9
SF3B3-202ENST00000562722 MRPL36Q9P0J6 103 aaKnown RBP9.43□□□□□ -0.9
SF3B3-202ENST00000562722 COPZ2Q9P299 210 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 TBC1D24Q9ULP9 559 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 KIAA1109Q2LD37 5005 aa9.43□□□□□ -0.9
SF3B3-202ENST00000562722 IGHV4-4A0A075B6R2 117 aa9.42□□□□□ -0.9
SF3B3-202ENST00000562722 INS-IGF2F8WCM5 200 aa9.42□□□□□ -0.9
SF3B3-202ENST00000562722 GIG44P09565 113 aaPredicted RBP9.42□□□□□ -0.9
SF3B3-202ENST00000562722 ELK1P19419 428 aa9.42□□□□□ -0.9
SF3B3-202ENST00000562722 CRYBB3P26998 211 aa9.42□□□□□ -0.9
SF3B3-202ENST00000562722 NCS1P62166 190 aa9.42□□□□□ -0.9
SF3B3-202ENST00000562722 MLANAQ16655 118 aa9.42□□□□□ -0.9
SF3B3-202ENST00000562722 SP6Q3SY56 376 aa9.42□□□□□ -0.9
SF3B3-202ENST00000562722 PSMG4Q5JS54 123 aa9.42□□□□□ -0.9
SF3B3-202ENST00000562722 OR4X1Q8NH49 305 aa9.42□□□□□ -0.9
SF3B3-202ENST00000562722 FNDC4Q9H6D8 234 aaPredicted RBP9.42□□□□□ -0.9
SF3B3-202ENST00000562722 A0A087WXM4 84 aa9.41□□□□□ -0.9
SF3B3-202ENST00000562722 RPS10-NUDT3A0A1W2PQS6 291 aa9.41□□□□□ -0.9
SF3B3-202ENST00000562722 HELTA6NFD8 242 aa9.41□□□□□ -0.9
SF3B3-202ENST00000562722 VBP1P61758 197 aa9.41□□□□□ -0.9
SF3B3-202ENST00000562722 SCGB2B2Q4G0G5 96 aa9.41□□□□□ -0.9
SF3B3-202ENST00000562722 CCDC71LQ8N9Z2 235 aa9.41□□□□□ -0.9
SF3B3-202ENST00000562722 TRAV30A0A087WSZ9 112 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 ELOA3CA0A087WX78 387 aaPredicted RBP9.4□□□□□ -0.9
SF3B3-202ENST00000562722 ZNF705EA8MWA4 302 aaPredicted RBP9.4□□□□□ -0.9
SF3B3-202ENST00000562722 CD3DP04234 171 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 P0C879 139 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 RPL5P46777 297 aaKnown RBP9.4□□□□□ -0.9
SF3B3-202ENST00000562722 PVRIGQ6DKI7 326 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 ZNF767PQ75MW2 155 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 ARRDC1Q8N5I2 433 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 ZFAND1Q8TCF1 268 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 DCANP1Q8TF63 244 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 Q8WTZ3 238 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 HEYLQ9NQ87 328 aaPredicted RBP9.4□□□□□ -0.9
SF3B3-202ENST00000562722 KLK11Q9UBX7 282 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 X6R8D5 127 aa9.4□□□□□ -0.9
SF3B3-202ENST00000562722 A0A0G2JRQ6 117 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 IGKV1-17P01599 117 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 HNRNPCP07910 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
SF3B3-202ENST00000562722 HTR2BP41595 481 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 AP2S1P53680 142 aaPredicted RBP9.39□□□□□ -0.91
SF3B3-202ENST00000562722 SPCS3P61009 180 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 NUTF2P61970 127 aaKnown RBP9.39□□□□□ -0.91
SF3B3-202ENST00000562722 SNRPD3P62318 126 aaKnown RBP9.39□□□□□ -0.91
SF3B3-202ENST00000562722 MZT2AQ6P582 158 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 LHFPL1Q86WI0 220 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 OR1S2Q8NGQ3 325 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 OR13C8Q8NGS7 320 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 OR52I2Q8NH67 350 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 RAB40CQ96S21 281 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 RNF126Q9BV68 326 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 FUNDC2Q9BWH2 189 aa9.39□□□□□ -0.91
SF3B3-202ENST00000562722 DEFB131BA0A096LNP1 70 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 CEBPZOSA8MTT3 80 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 TNFAIP8O95379 198 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 TBPP20226 339 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 UCP1P25874 307 aa9.38□□□□□ -0.91
SF3B3-202ENST00000562722 OR10J1P30954 320 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms