RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 PUS1Q9Y606 427 aaKnown RBP eCLIP17.36■□□□□ 0.37
TMEM170A-202ENST00000561878 IGKV3-7A0A075B6H7 116 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 IGHV3OR16-13A0A075B7E8 117 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 IGHV3-74A0A0B4J1X5 117 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 A0A0G2JRQ6 117 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 TMEM50AO95807 157 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 SPCS3P61009 180 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 TNFRSF9Q07011 255 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 TCF24Q7RTU0 167 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 LYG2Q86SG7 212 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 APRG1Q8IVJ8 170 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 RNF183Q96D59 192 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 PRRT1Q99946 306 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 RTBDNQ9BSG5 229 aaPredicted RBP17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 TMEM231Q9H6L2 316 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 MAP6D1Q9H9H5 199 aa17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.35■□□□□ 0.37
TMEM170A-202ENST00000561878 A0A0J9YWU9 116 aa17.34■□□□□ 0.37
TMEM170A-202ENST00000561878 RPL5P46777 297 aaKnown RBP17.34■□□□□ 0.37
TMEM170A-202ENST00000561878 OR4C16Q8NGL9 310 aa17.34■□□□□ 0.37
TMEM170A-202ENST00000561878 OR52E5Q8NH55 327 aa17.34■□□□□ 0.37
TMEM170A-202ENST00000561878 ST8SIA2Q92186 375 aa17.34■□□□□ 0.37
TMEM170A-202ENST00000561878 VSIRQ9H7M9 311 aa17.34■□□□□ 0.37
TMEM170A-202ENST00000561878 ZFAND3Q9H8U3 227 aa17.34■□□□□ 0.37
TMEM170A-202ENST00000561878 CLN5O75503 358 aa17.33■□□□□ 0.36
TMEM170A-202ENST00000561878 TMBIM6P55061 237 aa17.33■□□□□ 0.36
TMEM170A-202ENST00000561878 AARDQ4LEZ3 155 aa17.33■□□□□ 0.36
TMEM170A-202ENST00000561878 GBGT1Q8N5D6 347 aa17.33■□□□□ 0.36
TMEM170A-202ENST00000561878 DYNC2LI1Q8TCX1 351 aa17.33■□□□□ 0.36
TMEM170A-202ENST00000561878 GLYATL2Q8WU03 294 aa17.33■□□□□ 0.36
TMEM170A-202ENST00000561878 RPS10-NUDT3A0A1W2PQS6 291 aa17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 CXorf65A6NEN9 183 aa17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 CRYM-AS1A6NIL9 109 aa17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 DNASE2O00115 360 aaPredicted RBP17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 NOL3O60936 208 aaKnown RBP17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 HTR2BP41595 481 aa17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 BSXQ3C1V8 233 aa17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 Q6ZRM9 215 aa17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 TMEM217Q8N7C4 229 aa17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 OR4X1Q8NH49 305 aa17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 GPR132Q9UNW8 380 aa17.32■□□□□ 0.36
TMEM170A-202ENST00000561878 A0A1W2PS18 150 aa17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 ATF4P18848 351 aaPredicted RBP17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 NPPCP23582 126 aa17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 RPL11P62913 178 aaKnown RBP17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 SELENOHQ8IZQ5 122 aaKnown RBP17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 LHFPL5Q8TAF8 219 aa17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 CSTL1Q9H114 145 aa17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 FNDC4Q9H6D8 234 aaPredicted RBP17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 HEYLQ9NQ87 328 aaPredicted RBP17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 CACFD1Q9UGQ2 172 aa17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 RSL24D1Q9UHA3 163 aaKnown RBP17.31■□□□□ 0.36
TMEM170A-202ENST00000561878 TRAV30A0A087WSZ9 112 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 TRAV2A0A0B4J234 112 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 A0A1B0GU03 582 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 NUPR2A6NF83 97 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 MPTX1A8MV57 137 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 PMS2P11Q13670 270 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 TMEM268Q5VZI3 342 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 OR51S1Q8NGJ8 323 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 TMEM230Q96A57 120 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 NARS2Q96I59 477 aaKnown RBP17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 SCGB3A2Q96PL1 93 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 METTL26Q96S19 204 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 MS4A6AQ9H2W1 248 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 CACNG5Q9UF02 275 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 SCP2D1Q9UJQ7 156 aa17.3■□□□□ 0.36
TMEM170A-202ENST00000561878 ANKRD20A5PA0PJZ0 165 aa17.29■□□□□ 0.36
TMEM170A-202ENST00000561878 GSTZ1O43708 216 aaPredicted RBP17.29■□□□□ 0.36
TMEM170A-202ENST00000561878 DFFBO76075 338 aa17.29■□□□□ 0.36
TMEM170A-202ENST00000561878 APOHP02749 345 aaPredicted RBP17.29■□□□□ 0.36
TMEM170A-202ENST00000561878 ZNF124Q15973 351 aa17.29■□□□□ 0.36
TMEM170A-202ENST00000561878 KCNIP3Q9Y2W7 256 aa17.29■□□□□ 0.36
TMEM170A-202ENST00000561878 IGHV3-66A0A0C4DH42 116 aa17.28■□□□□ 0.36
TMEM170A-202ENST00000561878 CEBPZOSA8MTT3 80 aa17.28■□□□□ 0.36
TMEM170A-202ENST00000561878 C2orf83Q53S99 150 aa17.28■□□□□ 0.36
TMEM170A-202ENST00000561878 GATAD1Q8WUU5 269 aa17.28■□□□□ 0.36
TMEM170A-202ENST00000561878 IL22RA2Q969J5 263 aa17.28■□□□□ 0.36
TMEM170A-202ENST00000561878 GPR146Q96CH1 333 aa17.28■□□□□ 0.36
TMEM170A-202ENST00000561878 MRPL36Q9P0J6 103 aaKnown RBP17.28■□□□□ 0.36
TMEM170A-202ENST00000561878 TMEM56-RWDD3S4R434 201 aa17.28■□□□□ 0.36
TMEM170A-202ENST00000561878 SLC25A4P12235 298 aa17.27■□□□□ 0.36
TMEM170A-202ENST00000561878 MLANAQ16655 118 aa17.27■□□□□ 0.36
TMEM170A-202ENST00000561878 SLC24A4Q8NFF2 622 aa17.27■□□□□ 0.36
TMEM170A-202ENST00000561878 RNASEH2CQ8TDP1 164 aaKnown RBP17.27■□□□□ 0.36
TMEM170A-202ENST00000561878 RABAC1Q9UI14 185 aa17.27■□□□□ 0.36
TMEM170A-202ENST00000561878 DNAH1Q9P2D7 4330 aa17.26■□□□□ 0.35
TMEM170A-202ENST00000561878 CRYBB3P26998 211 aa17.26■□□□□ 0.35
TMEM170A-202ENST00000561878 NOXA1Q86UR1 476 aa17.26■□□□□ 0.35
TMEM170A-202ENST00000561878 LILRB2Q8N423 598 aa17.26■□□□□ 0.35
TMEM170A-202ENST00000561878 OR1S2Q8NGQ3 325 aa17.26■□□□□ 0.35
TMEM170A-202ENST00000561878 GRAMD2BQ96HH9 432 aa17.26■□□□□ 0.35
TMEM170A-202ENST00000561878 SULT1A3P0DMM9 295 aa17.25■□□□□ 0.35
TMEM170A-202ENST00000561878 SULT1A4P0DMN0 295 aa17.25■□□□□ 0.35
TMEM170A-202ENST00000561878 DEFB131AP59861 70 aa17.25■□□□□ 0.35
TMEM170A-202ENST00000561878 EWSR1Q01844 656 aaKnown RBP eCLIP17.25■□□□□ 0.35
TMEM170A-202ENST00000561878 TIGITQ495A1 244 aa17.25■□□□□ 0.35
TMEM170A-202ENST00000561878 ETFRF1Q6IPR1 90 aa17.25■□□□□ 0.35
TMEM170A-202ENST00000561878 SLIRPQ9GZT3 109 aaKnown RBP17.25■□□□□ 0.35
TMEM170A-202ENST00000561878 MCUBQ9NWR8 336 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms