RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 OR1L1Q8NH94 360 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 RBMXL1Q96E39 390 aaKnown RBP6.49□□□□□ -1.37
PALB2-202ENST00000561514 BTF3L4Q96K17 158 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 SLC35E1Q96K37 410 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 Q96M66 194 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 RCHY1Q96PM5 261 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 NABP2Q9BQ15 211 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 MIEN1Q9BRT3 115 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 ABHD14AQ9BUJ0 271 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 MRPL20Q9BYC9 149 aaKnown RBP6.49□□□□□ -1.37
PALB2-202ENST00000561514 ARV1Q9H2C2 271 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 ETV7Q9Y603 341 aa6.49□□□□□ -1.37
PALB2-202ENST00000561514 TRAV8-7A0A075B6U6 113 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 TRAV30A0A087WSZ9 112 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 TRAV14DV4A0A0A6YYC5 116 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 TGIF2-C20orf24A0A0A6YYL0 155 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 TRAV41A0A0B4J266 112 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 LCE6AA0A183 80 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 A8MZ25 164 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 F6UZH7 168 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 OVOL1O14753 267 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 NBR2O15453 112 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 XRCC3O43542 346 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 YPEL1O60688 119 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 HPRT1P00492 218 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 CD1AP06126 327 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 SNRPBP14678 240 aaKnown RBP6.48□□□□□ -1.37
PALB2-202ENST00000561514 BLVRBP30043 206 aaPredicted RBP6.48□□□□□ -1.37
PALB2-202ENST00000561514 SULT1A2P50226 295 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 CLINT1Q14677 625 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 GNMTQ14749 295 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 FAM27D1Q5T7N8 215 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 OR2G6Q5TZ20 316 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 ACSM6Q6P461 480 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 BTNL8Q6UX41 500 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 KCTD9Q7L273 389 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 ZNF738Q8NE65 137 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 OR10V1Q8NGI7 309 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 OR13C5Q8NGS8 318 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 MRPL30Q8TCC3 161 aaKnown RBP6.48□□□□□ -1.37
PALB2-202ENST00000561514 DCUN1D4Q92564 292 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 RPUSD4Q96CM3 377 aaKnown RBP6.48□□□□□ -1.37
PALB2-202ENST00000561514 WDR89Q96FK6 387 aaPredicted RBP6.48□□□□□ -1.37
PALB2-202ENST00000561514 RITA1Q96K30 269 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 YPEL2Q96QA6 119 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 TP53RKQ96S44 253 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 TM2D3Q9BRN9 247 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 MAGT1Q9H0U3 335 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 IFI27L2Q9H2X8 130 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 TAF9BQ9HBM6 251 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 TRAPPC2LQ9UL33 140 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 FLVCR2Q9UPI3 526 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 MRPS28Q9Y2Q9 187 aaKnown RBP6.48□□□□□ -1.37
PALB2-202ENST00000561514 WSB1Q9Y6I7 421 aa6.48□□□□□ -1.37
PALB2-202ENST00000561514 SAA2-SAA4A0A096LPE2 208 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 LINC01619G3V211 115 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 SLC25A17O43808 307 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 PDCD6O75340 191 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 CRYGCP07315 174 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 LGALS1P09382 135 aaKnown RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 FRMD6-AS1P0C7T7 363 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 SAA2P0DJI9 122 aaPredicted RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 EGR2P11161 476 aaPredicted RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 GP9P14770 177 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 FUT3P21217 361 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 ZBTB25P24278 435 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 CNTFRP26992 372 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 PPP1CCP36873 323 aaKnown RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 AKR1C2P52895 323 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 FGF8P55075 233 aaPredicted RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 RAB11AP62491 216 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 AKR1C1Q04828 323 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 CDPF1Q6NVV7 123 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 GLIPR1L1Q6UWM5 242 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 MITD1Q8WV92 249 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 DLX4Q92988 240 aaPredicted RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 MOB3AQ96BX8 217 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 S100A16Q96FQ6 103 aaKnown RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 CYYR1Q96J86 154 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 SELENOIQ9C0D9 397 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 CST11Q9H112 138 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 SLC35B3Q9H1N7 401 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 EDA2RQ9HAV5 297 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 OR2S2Q9NQN1 319 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 FAM212BQ9NTI7 297 aaPredicted RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 CKLFQ9UBR5 152 aa6.47□□□□□ -1.37
PALB2-202ENST00000561514 FOXA2Q9Y261 457 aaPredicted RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 STRAPQ9Y3F4 350 aaKnown RBP6.47□□□□□ -1.37
PALB2-202ENST00000561514 ALMS1Q8TCU4 4167 aa6.46□□□□□ -1.37
PALB2-202ENST00000561514 UMAD1C9J7I0 102 aa6.46□□□□□ -1.38
PALB2-202ENST00000561514 K7EPK0 472 aa6.46□□□□□ -1.38
PALB2-202ENST00000561514 NAPSAO96009 420 aa6.46□□□□□ -1.38
PALB2-202ENST00000561514 OR8U9P0C7N5 309 aa6.46□□□□□ -1.38
PALB2-202ENST00000561514 CD37P11049 281 aa6.46□□□□□ -1.38
PALB2-202ENST00000561514 LYL1P12980 280 aa6.46□□□□□ -1.38
PALB2-202ENST00000561514 MC5RP33032 325 aa6.46□□□□□ -1.38
PALB2-202ENST00000561514 CX3CL1P78423 397 aa6.46□□□□□ -1.38
PALB2-202ENST00000561514 PNRC1Q12796 327 aaPredicted RBP6.46□□□□□ -1.38
PALB2-202ENST00000561514 TMEM183BQ1AE95 376 aa6.46□□□□□ -1.38
PALB2-202ENST00000561514 ZNF880Q6PDB4 577 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms