RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 QTRT1Q9BXR0 403 aaKnown RBP5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 SCRT2Q9NQ03 307 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 PSG8Q9UQ74 426 aa5.47□□□□□ -1.53
TSPAN3-209ENST00000560715 OR4C46A6NHA9 309 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 F5H768 121 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 J3QR89 54 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 NAPSAO96009 420 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 APOHP02749 345 aaPredicted RBP5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 PTGDSP41222 190 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 HOXA4Q00056 320 aaPredicted RBP5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 MEF2CQ06413 473 aaPredicted RBP5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 AESQ08117 197 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 ARL16Q0P5N6 197 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 TMEM136Q6ZRR5 245 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 FA2HQ7L5A8 372 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 C1QL2Q7Z5L3 287 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 WDR31Q8NA23 367 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 VSTM2AQ8TAG5 236 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 OR51E1Q8TCB6 317 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 BOKQ9UMX3 212 aaPredicted RBP5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 LHFPL6Q9Y693 200 aa5.46□□□□□ -1.53
TSPAN3-209ENST00000560715 TRBV20OR9-2A0A075B6H5 130 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 KIR2DS5A0A0G2JLQ3 304 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 A0A0G2JNG1 304 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 C11orf98E9PRG8 122 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 H3BUT2 72 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 KIR2DS3K7RE56 304 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 BMPR1BO00238 502 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 CRXO43186 299 aaPredicted RBP5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 IGHV4-34P06331 123 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 RBMY1CP0DJD4 496 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 HERV-K104P61576 105 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 RPL8P62917 257 aaKnown RBP5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 KIR2DS5Q14953 304 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 MS4A18Q3C1V0 323 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 ADTRPQ96IZ2 230 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 TMEM70Q9BUB7 260 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 KCNIP2Q9NS61 270 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 KCNIP1Q9NZI2 227 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 SELENOKQ9Y6D0 94 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 SCN3AQ9NY46 2000 aa5.46□□□□□ -1.54
TSPAN3-209ENST00000560715 IGKV1-9A0A0C4DH69 117 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 A0A0G2JLM5 398 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 A6NDN8 102 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 SLC17A3O00476 420 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 CLDN1O95832 211 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 SLC25A6P12236 298 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 HTR1DP28221 377 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 HHEXQ03014 270 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 TFF2Q03403 129 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 EIF3IQ13347 325 aaKnown RBP5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 SLC22A18ASQ8N1D0 253 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 OR10G9Q8NGN4 311 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 OR10G7Q8NGN6 311 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 OR4C12Q96R67 309 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 TXNIPQ9H3M7 391 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 ESM1Q9NQ30 184 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 ZNF835Q9Y2P0 537 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 SPCS1Q9Y6A9 102 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 ARL2-SNX15V9GYD0 113 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 F5P12259 2224 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 A0A0J9YY10 115 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 SPTY2D1-AS1A0A0U1RR47 76 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 M0R2Z0 102 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 CRYAAP02489 173 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 USF1P22415 310 aaPredicted RBP5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 PLCXD2Q0VAA5 305 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 KISS1Q15726 138 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 TMEM97Q5BJF2 176 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 SPATA31B1PQ5VZV4 182 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 WDR74Q6RFH5 385 aaPredicted RBP5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 LSM10Q969L4 123 aaKnown RBP5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 RERGQ96A58 199 aaPredicted RBP5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 CDX2Q99626 313 aaPredicted RBP5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 UNC80Q8N2C7 3258 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 A0A1W2PPM0 123 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 HLA-DQA1P01909 254 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 HIST1H1EP10412 219 aaKnown RBP5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 PPOXP50336 477 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 TIGITQ495A1 244 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 CRIP3Q6Q6R5 217 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 OR4C3Q8NH37 302 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 OR10G6Q8NH81 332 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 KIR2DL5BQ8NHK3 375 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 MRAPQ8TCY5 172 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 ZNF418Q8TF45 676 aaPredicted RBP5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 PMCHL2Q9BQD1 86 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 HES7Q9BYE0 225 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 MS4A6AQ9H2W1 248 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 TRAPPC2LQ9UL33 140 aa5.45□□□□□ -1.54
TSPAN3-209ENST00000560715 TMEM131Q92545 1883 aa5.44□□□□□ -1.54
TSPAN3-209ENST00000560715 UBE2L5PA0A1B0GUS4 154 aa5.44□□□□□ -1.54
TSPAN3-209ENST00000560715 PPYP01298 95 aa5.44□□□□□ -1.54
TSPAN3-209ENST00000560715 IGHMP01871 453 aa5.44□□□□□ -1.54
TSPAN3-209ENST00000560715 ATP5G3P48201 142 aa5.44□□□□□ -1.54
TSPAN3-209ENST00000560715 CCL7P80098 99 aa5.44□□□□□ -1.54
TSPAN3-209ENST00000560715 PSG7Q13046 419 aa5.44□□□□□ -1.54
TSPAN3-209ENST00000560715 PIK3CD-AS1Q5SR53 167 aa5.44□□□□□ -1.54
TSPAN3-209ENST00000560715 APRG1Q8IVJ8 170 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms