RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CDS2O95674 445 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 ANXA3P12429 323 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 FAUP35544 74 aaKnown RBP10.48□□□□□ -0.73
TPM1-223ENST00000560445 SRPXP78539 464 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 ETFRF1Q6IPR1 90 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 GRAMD2BQ96HH9 432 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 SELENOKQ9Y6D0 94 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 RYR3Q15413 4870 aa10.48□□□□□ -0.73
TPM1-223ENST00000560445 NUPR2A6NF83 97 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 CCDC160A6NGH7 325 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 H3BMQ9 156 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 DNASE2O00115 360 aaPredicted RBP10.47□□□□□ -0.73
TPM1-223ENST00000560445 SLC25A4P12235 298 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 TNFRSF9Q07011 255 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 ODF3L2Q3SX64 289 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 SP6Q3SY56 376 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 AARDQ4LEZ3 155 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 PVRIGQ6DKI7 326 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 MCFD2Q8NI22 146 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
TPM1-223ENST00000560445 GATAD1Q8WUU5 269 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 IL22RA2Q969J5 263 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 METTL26Q96S19 204 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 RNF2Q99496 336 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 HEYLQ9NQ87 328 aaPredicted RBP10.47□□□□□ -0.73
TPM1-223ENST00000560445 UBQLN2Q9UHD9 624 aa10.47□□□□□ -0.73
TPM1-223ENST00000560445 TENM2Q9NT68 2774 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 IGHV3OR16-8A0A075B7F1 116 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 GSTZ1O43708 216 aaPredicted RBP10.46□□□□□ -0.73
TPM1-223ENST00000560445 CLN5O75503 358 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 OR5AC1P0C628 307 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 RNASE2P10153 161 aaKnown RBP10.46□□□□□ -0.73
TPM1-223ENST00000560445 NPPCP23582 126 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 ETV6P41212 452 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 AP3S2P59780 193 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 RPL11P62913 178 aaKnown RBP10.46□□□□□ -0.73
TPM1-223ENST00000560445 SPINK9Q5DT21 86 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 TOMM20LQ6UXN7 152 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 TCF24Q7RTU0 167 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 OR4X1Q8NH49 305 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 PFDN2Q9UHV9 154 aa10.46□□□□□ -0.73
TPM1-223ENST00000560445 PUS1Q9Y606 427 aaKnown RBP eCLIP10.46□□□□□ -0.73
TPM1-223ENST00000560445 ANKRD20A5PA0PJZ0 165 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 CXorf65A6NEN9 183 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 CRYM-AS1A6NIL9 109 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 CEBPZOSA8MTT3 80 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 MPTX1A8MV57 137 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 TMEM50AO95807 157 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 TNFSF8P32971 234 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 S100A5P33763 92 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 NUP62P37198 522 aaPredicted RBP10.45□□□□□ -0.74
TPM1-223ENST00000560445 DEFB135Q30KP9 77 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 TMEM41BQ5BJD5 291 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 TMEM268Q5VZI3 342 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 FAAP20Q6NZ36 180 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 OR51S1Q8NGJ8 323 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 OR4C16Q8NGL9 310 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 TMEM230Q96A57 120 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 RNF183Q96D59 192 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 SLIRPQ9GZT3 109 aaKnown RBP10.45□□□□□ -0.74
TPM1-223ENST00000560445 VSIRQ9H7M9 311 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 MAP6D1Q9H9H5 199 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 MCUBQ9NWR8 336 aa10.45□□□□□ -0.74
TPM1-223ENST00000560445 KLK5Q9Y337 293 aaPredicted RBP10.45□□□□□ -0.74
TPM1-223ENST00000560445 IGHV3-48P01763 117 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 SULT1A3P0DMM9 295 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 SULT1A4P0DMN0 295 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 AP2S1P53680 142 aaPredicted RBP10.44□□□□□ -0.74
TPM1-223ENST00000560445 ATP5IP56385 69 aaPredicted RBP10.44□□□□□ -0.74
TPM1-223ENST00000560445 IZUMO4Q1ZYL8 232 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 BSXQ3C1V8 233 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 LYG2Q86SG7 212 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 SLC24A4Q8NFF2 622 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 OR1S2Q8NGQ3 325 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 GLYATL2Q8WU03 294 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 DEDD2Q8WXF8 326 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 RTBDNQ9BSG5 229 aaPredicted RBP10.44□□□□□ -0.74
TPM1-223ENST00000560445 CSTL1Q9H114 145 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 CACNG5Q9UF02 275 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 GPR132Q9UNW8 380 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
TPM1-223ENST00000560445 HELTA6NFD8 242 aa10.43□□□□□ -0.74
TPM1-223ENST00000560445 RPL35AP18077 110 aaKnown RBP10.43□□□□□ -0.74
TPM1-223ENST00000560445 TFPI2P48307 235 aa10.43□□□□□ -0.74
TPM1-223ENST00000560445 C2orf83Q53S99 150 aa10.43□□□□□ -0.74
TPM1-223ENST00000560445 FAM90A2PQ658T7 463 aa10.43□□□□□ -0.74
TPM1-223ENST00000560445 Q8WTZ3 238 aa10.43□□□□□ -0.74
TPM1-223ENST00000560445 ZFAND3Q9H8U3 227 aa10.43□□□□□ -0.74
TPM1-223ENST00000560445 IGKV3-7A0A075B6H7 116 aa10.42□□□□□ -0.74
TPM1-223ENST00000560445 IGHV3-49A0A0A0MS15 119 aa10.42□□□□□ -0.74
TPM1-223ENST00000560445 FABP1P07148 127 aa10.42□□□□□ -0.74
TPM1-223ENST00000560445 NPY1RP25929 384 aa10.42□□□□□ -0.74
TPM1-223ENST00000560445 CCR6P51684 374 aa10.42□□□□□ -0.74
TPM1-223ENST00000560445 PYDC2Q56P42 97 aa10.42□□□□□ -0.74
TPM1-223ENST00000560445 SELENOHQ8IZQ5 122 aaKnown RBP10.42□□□□□ -0.74
TPM1-223ENST00000560445 ST8SIA2Q92186 375 aa10.42□□□□□ -0.74
TPM1-223ENST00000560445 MFFQ9GZY8 342 aa10.42□□□□□ -0.74
TPM1-223ENST00000560445 MS4A6AQ9H2W1 248 aa10.42□□□□□ -0.74
TPM1-223ENST00000560445 RABAC1Q9UI14 185 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms