RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 UNQ9165/PRO28630Q6UXU0 137 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 ADAMTSL5Q6ZMM2 481 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 NOXA1Q86UR1 476 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 C12orf45Q8N5I9 185 aaPredicted RBP12.8□□□□□ -0.36
RPL28-209ENST00000560055 UBAC2Q8NBM4 344 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 OR4C12Q96R67 309 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 MRPL36Q9P0J6 103 aaKnown RBP12.8□□□□□ -0.36
RPL28-209ENST00000560055 SORL1Q92673 2214 aa12.8□□□□□ -0.36
RPL28-209ENST00000560055 SYNGR2O43760 224 aa12.79□□□□□ -0.36
RPL28-209ENST00000560055 IFNA10P01566 189 aa12.79□□□□□ -0.36
RPL28-209ENST00000560055 IGLV1-51P01701 117 aa12.79□□□□□ -0.36
RPL28-209ENST00000560055 IAPPP10997 89 aa12.79□□□□□ -0.36
RPL28-209ENST00000560055 OR4X1Q8NH49 305 aa12.79□□□□□ -0.36
RPL28-209ENST00000560055 MAGT1Q9H0U3 335 aa12.79□□□□□ -0.36
RPL28-209ENST00000560055 ZMAT5Q9UDW3 170 aaKnown RBP12.79□□□□□ -0.36
RPL28-209ENST00000560055 IGHV3-35A0A0C4DH35 117 aa12.78□□□□□ -0.36
RPL28-209ENST00000560055 TMEM213A2RRL7 107 aa12.78□□□□□ -0.36
RPL28-209ENST00000560055 C2orf70A6NJV1 201 aa12.78□□□□□ -0.36
RPL28-209ENST00000560055 C15orf62A8K5M9 175 aa12.78□□□□□ -0.36
RPL28-209ENST00000560055 INMT-MINDY4F8WBC2 141 aa12.78□□□□□ -0.36
RPL28-209ENST00000560055 NUPL2O15504 423 aaKnown RBP12.78□□□□□ -0.36
RPL28-209ENST00000560055 NKX2-1P43699 371 aaPredicted RBP12.78□□□□□ -0.36
RPL28-209ENST00000560055 NPBWR1P48145 328 aa12.78□□□□□ -0.36
RPL28-209ENST00000560055 IAH1Q2TAA2 248 aaPredicted RBP12.78□□□□□ -0.36
RPL28-209ENST00000560055 ZBTB8BQ8NAP8 495 aaPredicted RBP12.78□□□□□ -0.36
RPL28-209ENST00000560055 TMEM190Q8WZ59 177 aa12.78□□□□□ -0.36
RPL28-209ENST00000560055 CIB3Q96Q77 187 aaPredicted RBP12.78□□□□□ -0.36
RPL28-209ENST00000560055 RPS10-NUDT3A0A1W2PQS6 291 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 SNRPGP15A8MWD9 76 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 NDUFA4O00483 81 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 CCSO14618 274 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 GNG7O60262 68 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 PRAF2O60831 178 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 LY86O95711 162 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 EDN2P20800 178 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 POLR2GP62487 172 aaKnown RBP eCLIP12.77□□□□□ -0.37
RPL28-209ENST00000560055 PRSS54Q6PEW0 395 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 HAPLN4Q86UW8 402 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 PALMDQ9NP74 551 aa12.77□□□□□ -0.37
RPL28-209ENST00000560055 WI2-2373I1.2A0A1W2PRP0 233 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 ZNF320A2RRD8 509 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 CLN5O75503 358 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 TMEM50AO95807 157 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 SLC25A4P12235 298 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 FOLR2P14207 255 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 SPNP16150 400 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 ELLP55199 621 aaPredicted RBP12.76□□□□□ -0.37
RPL28-209ENST00000560055 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
RPL28-209ENST00000560055 UXS1Q8NBZ7 420 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 TMEM116Q8NCL8 245 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 GPN1Q9HCN4 374 aaPredicted RBP12.76□□□□□ -0.37
RPL28-209ENST00000560055 DNAH9Q9NYC9 4486 aa12.76□□□□□ -0.37
RPL28-209ENST00000560055 K7EIL1 84 aa12.75□□□□□ -0.37
RPL28-209ENST00000560055 WRBO00258 174 aa12.75□□□□□ -0.37
RPL28-209ENST00000560055 PTTG1O95997 202 aa12.75□□□□□ -0.37
RPL28-209ENST00000560055 C8orf88P0DMB2 117 aa12.75□□□□□ -0.37
RPL28-209ENST00000560055 CBLN1P23435 193 aa12.75□□□□□ -0.37
RPL28-209ENST00000560055 CD69Q07108 199 aa12.75□□□□□ -0.37
RPL28-209ENST00000560055 TM4SF20Q53R12 229 aa12.75□□□□□ -0.37
RPL28-209ENST00000560055 ZNF256Q9Y2P7 627 aaPredicted RBP12.75□□□□□ -0.37
RPL28-209ENST00000560055 UFC1Q9Y3C8 167 aa12.75□□□□□ -0.37
RPL28-209ENST00000560055 PRSS46E5RG02 174 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 SSSCA1O60232 199 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 IGKV1-17P01599 117 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 MBPP02686 304 aaPredicted RBP12.74□□□□□ -0.37
RPL28-209ENST00000560055 IFNA4P05014 189 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 RND2P52198 227 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 PAX9P55771 341 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 IL15RAQ13261 267 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 ETFRF1Q6IPR1 90 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 SLC16A13Q7RTY0 426 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 CACNG8Q8WXS5 425 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 DAZ1Q9NQZ3 744 aaKnown RBP12.74□□□□□ -0.37
RPL28-209ENST00000560055 GSKIPQ9P0R6 139 aa12.74□□□□□ -0.37
RPL28-209ENST00000560055 RCL1Q9Y2P8 373 aaKnown RBP12.74□□□□□ -0.37
RPL28-209ENST00000560055 FAM25EA8MYX2 175 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 K7EMT4 169 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 IGLC1P0CG04 106 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 GPX4P36969 197 aaPredicted RBP12.73□□□□□ -0.37
RPL28-209ENST00000560055 RAB11AP62491 216 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 RPP30P78346 268 aaKnown RBP12.73□□□□□ -0.37
RPL28-209ENST00000560055 DEFB114Q30KQ6 69 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 OR2K2Q8NGT1 345 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 MARC2Q969Z3 335 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 SMIM8Q96KF7 97 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 C2orf50Q96LR7 162 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 PRR25Q96S07 402 aa12.73□□□□□ -0.37
RPL28-209ENST00000560055 TRAV30A0A087WSZ9 112 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 C5orf51A6NDU8 294 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 H3BP45 60 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 SCGB1D2O95969 90 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 CD300EQ496F6 205 aaPredicted RBP12.72□□□□□ -0.37
RPL28-209ENST00000560055 SPANXN5Q5MJ07 72 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 TOMM20LQ6UXN7 152 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 GSG1LQ6UXU4 331 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 ZNF600Q6ZNG1 722 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 OR1S2Q8NGQ3 325 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 NPIPB3Q92617 1050 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 RAB40CQ96S21 281 aa12.72□□□□□ -0.37
RPL28-209ENST00000560055 C20orf24Q9BUV8 137 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms