RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 PRSS54Q6PEW0 395 aa11.11□□□□□ -0.63
SMAD6-204ENST00000559931 CLEC19AQ6UXS0 136 aa11.11□□□□□ -0.63
SMAD6-204ENST00000559931 OR10P1Q8NGE3 313 aa11.11□□□□□ -0.63
SMAD6-204ENST00000559931 DCUN1D4Q92564 292 aa11.11□□□□□ -0.63
SMAD6-204ENST00000559931 SLC25A31Q9H0C2 315 aa11.11□□□□□ -0.63
SMAD6-204ENST00000559931 MBD2Q9UBB5 411 aa11.11□□□□□ -0.63
SMAD6-204ENST00000559931 PEF1Q9UBV8 284 aaKnown RBP11.11□□□□□ -0.63
SMAD6-204ENST00000559931 CCNKO75909 580 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 CST7O76096 145 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 CLEC3BP05452 202 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 GPX4P36969 197 aaPredicted RBP11.1□□□□□ -0.63
SMAD6-204ENST00000559931 NUP62P37198 522 aaPredicted RBP11.1□□□□□ -0.63
SMAD6-204ENST00000559931 P2RY1P47900 373 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 DEFB136Q30KP8 78 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 FAM209BQ5JX69 171 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 TMEM14EPQ6UXP3 125 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 STX12Q86Y82 276 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 OR1N2Q8NGR9 330 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 ZNF502Q8TBZ5 544 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 ACY3Q96HD9 319 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 SLC35E1Q96K37 410 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 C11orf1Q9H5F2 150 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 RANGRFQ9HD47 186 aaPredicted RBP11.1□□□□□ -0.63
SMAD6-204ENST00000559931 LYRM2Q9NU23 88 aaPredicted RBP11.1□□□□□ -0.63
SMAD6-204ENST00000559931 WNK1Q9H4A3 2382 aa11.1□□□□□ -0.63
SMAD6-204ENST00000559931 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.09□□□□□ -0.63
SMAD6-204ENST00000559931 OR2T8A6NH00 312 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 ADARB2-AS1A8MUL3 147 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 I3L521 148 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 M0QZ24 198 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 GNG7O60262 68 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
SMAD6-204ENST00000559931 SLC25A4P12235 298 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 GPR183P32249 361 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 NPBWR1P48145 328 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 CD69Q07108 199 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 Q5BKY6 102 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 SLC16A13Q7RTY0 426 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 TMEM252Q8N6L7 170 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 TMEM217Q8N7C4 229 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 OR4F17Q8NGA8 305 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 CACNG8Q8WXS5 425 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 DUX3Q96PT4 197 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 OR4F4Q96R69 305 aa11.09□□□□□ -0.63
SMAD6-204ENST00000559931 FNDC4Q9H6D8 234 aaPredicted RBP11.09□□□□□ -0.63
SMAD6-204ENST00000559931 GAR1Q9NY12 217 aaKnown RBP11.09□□□□□ -0.63
SMAD6-204ENST00000559931 FXYD6-FXYD2A0A087WZ82 144 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 TRAV14DV4A0A0A6YYC5 116 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 IGSF23A1L1A6 192 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 SMCO3A2RU48 225 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 SMLR1H3BR10 107 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 CCL24O00175 119 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 ARL3P36405 182 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 SULT1A1P50225 295 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 RND2P52198 227 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 RUNX1Q01196 453 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 CCDC140Q96MF4 163 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 TXN2Q99757 166 aa11.08□□□□□ -0.64
SMAD6-204ENST00000559931 IGHV4OR15-8A0A075B7B6 117 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 A0A087WW49 117 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 LINC01619G3V211 115 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 NUPL2O15504 423 aaKnown RBP11.07□□□□□ -0.64
SMAD6-204ENST00000559931 SCGB2A1O75556 95 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 SCAF4O95104 1147 aaKnown RBP11.07□□□□□ -0.64
SMAD6-204ENST00000559931 TRBV12-3P01733 135 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 PF4P02776 101 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 RPL12P30050 165 aaKnown RBP11.07□□□□□ -0.64
SMAD6-204ENST00000559931 HBG1P69891 147 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 HBG2P69892 147 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 NHLH2Q02577 135 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 AKR1C1Q04828 323 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 SLC38A11Q08AI6 406 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 ZNF616Q08AN1 781 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 ZNF546Q86UE3 836 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 LILRB2Q8N423 598 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 INO80EQ8NBZ0 244 aaPredicted RBP11.07□□□□□ -0.64
SMAD6-204ENST00000559931 OR4X1Q8NH49 305 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 NPIPB3Q92617 1050 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 RAX2Q96IS3 184 aa11.07□□□□□ -0.64
SMAD6-204ENST00000559931 PMS2P5A8MQ11 134 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 GGCTO75223 188 aaKnown RBP11.06□□□□□ -0.64
SMAD6-204ENST00000559931 OR2C1O95371 312 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 LYL1P12980 280 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 ZP3P21754 424 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 S100A11P31949 105 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 MYCNOSP40205 109 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 DLK1P80370 383 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 EWSR1Q01844 656 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■■□□□ 13.2
SMAD6-204ENST00000559931 ARL16Q0P5N6 197 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 GAMTQ14353 236 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 RPEL1Q2QD12 228 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 ACOT7LQ6ZUV0 252 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 OR1S2Q8NGQ3 325 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 BSCL2Q96G97 398 aaPredicted RBP11.06□□□□□ -0.64
SMAD6-204ENST00000559931 ST6GAL2Q96JF0 529 aa11.06□□□□□ -0.64
SMAD6-204ENST00000559931 MRPL36Q9P0J6 103 aaKnown RBP11.06□□□□□ -0.64
SMAD6-204ENST00000559931 TRAV30A0A087WSZ9 112 aa11.05□□□□□ -0.64
SMAD6-204ENST00000559931 IGHV3-35A0A0C4DH35 117 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms