RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 BORCS5Q969J3 196 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 NIPSNAP1Q9BPW8 284 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 CEP192Q8TEP8 1941 aa0.16□□□□□ -2.38
CASC4-210ENST00000559550 E9PCH4 1651 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 DPRXA6NFQ7 191 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 FAAHO00519 579 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 TGOLN2O43493 480 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 SULT1B1O43704 296 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 HLA-DRB1P01911 266 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 EFNA4P52798 201 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 DEFA1P59665 94 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 RPS20P60866 119 aaKnown RBP0.15□□□□□ -2.39
CASC4-210ENST00000559550 SNRPD2P62316 118 aaKnown RBP0.15□□□□□ -2.39
CASC4-210ENST00000559550 MPV17LQ2QL34 196 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 SPRNQ5BIV9 151 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 HIST2H3PS2Q5TEC6 136 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 TEX261Q6UWH6 196 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 SOSTDC1Q6X4U4 206 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 HIST3H2BBQ8N257 126 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 C3orf56Q8N813 242 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 OPTNQ96CV9 577 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 SMR3AQ99954 134 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 LLPHQ9BRT6 129 aaKnown RBP0.15□□□□□ -2.39
CASC4-210ENST00000559550 USE1Q9NZ43 259 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 ERGIC3Q9Y282 383 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 LSM5Q9Y4Y9 91 aaKnown RBP0.15□□□□□ -2.39
CASC4-210ENST00000559550 U3KQ87 197 aa0.15□□□□□ -2.39
CASC4-210ENST00000559550 C9orf84Q5VXU9 1444 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 MAST4O15021 2626 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 TGIF2-C20orf24A0A0A6YYL0 155 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 EXOC1LA0A1B0GW35 172 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 CCDC160A6NGH7 325 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 ZNF736B4DX44 427 aaPredicted RBP0.14□□□□□ -2.39
CASC4-210ENST00000559550 TCL1BO95988 128 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 AP2S1P53680 142 aaPredicted RBP0.14□□□□□ -2.39
CASC4-210ENST00000559550 CDC42P60953 191 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 OR10J5Q8NHC4 309 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 PTH2Q96A98 100 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 TOMM6Q96B49 74 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 PPP1R2P1Q96PQ5 205 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 SLC39A9Q9NUM3 307 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 RASL12Q9NYN1 266 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 PKIGQ9Y2B9 76 aa0.14□□□□□ -2.39
CASC4-210ENST00000559550 HECW1Q76N89 1606 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 PEAK1Q9H792 1746 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 A0A1W2PPM0 123 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 CCL25O15444 150 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 OR2B3O76000 313 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 OR2J2O76002 312 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 HIST1H1TP22492 207 aaPredicted RBP0.13□□□□□ -2.39
CASC4-210ENST00000559550 RPL5P46777 297 aaKnown RBP0.13□□□□□ -2.39
CASC4-210ENST00000559550 C20orf196Q8IYI0 205 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 CLECL1Q8IZS7 167 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 ANKRD29Q8N6D5 301 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 OR13D1Q8NGV5 346 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 CFAP53Q96M91 514 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 PRTFDC1Q9NRG1 225 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 HS3ST2Q9Y278 367 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 ATP6V1DQ9Y5K8 247 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 MTUS2Q5JR59 1369 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 KIF13BQ9NQT8 1826 aa0.13□□□□□ -2.39
CASC4-210ENST00000559550 WRNQ14191 1432 aaPredicted RBP eCLIP0.13□□□□□ -2.39
CASC4-210ENST00000559550 HECW2Q9P2P5 1572 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 TRAV9-1A0A075B6T8 112 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 DCTN3O75935 186 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 DNAL4O96015 105 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 IFNA10P01566 189 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 C8orf74Q6P047 294 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 LPCAT3Q6P1A2 487 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 GPR146Q96CH1 333 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 TSPAN32Q96QS1 320 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 COMMD5Q9GZQ3 224 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 EPDR1Q9UM22 224 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 TMEM56-RWDD3S4R434 201 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 SCN3AQ9NY46 2000 aa0.12□□□□□ -2.39
CASC4-210ENST00000559550 SYNE1Q8NF91 8797 aaKnown RBP0.12□□□□□ -2.39
CASC4-210ENST00000559550 ASCC3Q8N3C0 2202 aaKnown RBP0.11□□□□□ -2.39
CASC4-210ENST00000559550 PSMD12O00232 456 aaPredicted RBP0.11□□□□□ -2.39
CASC4-210ENST00000559550 TNNC2P02585 160 aa0.11□□□□□ -2.39
CASC4-210ENST00000559550 SPCS3P61009 180 aa0.11□□□□□ -2.39
CASC4-210ENST00000559550 PSG9Q00887 426 aa0.11□□□□□ -2.39
CASC4-210ENST00000559550 OR2F1Q13607 317 aa0.11□□□□□ -2.39
CASC4-210ENST00000559550 CDKL4Q5MAI5 379 aa0.11□□□□□ -2.39
CASC4-210ENST00000559550 OR51V1Q9H2C8 321 aa0.11□□□□□ -2.39
CASC4-210ENST00000559550 OSTCQ9NRP0 149 aa0.11□□□□□ -2.39
CASC4-210ENST00000559550 CACNA1EQ15878 2313 aa0.11□□□□□ -2.39
CASC4-210ENST00000559550 DOCK3Q8IZD9 2030 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 PROSCO94903 275 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 CALB1P05937 261 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 KRTAP2-3P0C7H8 128 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 HIST1H1EP10412 219 aaKnown RBP0.1□□□□□ -2.39
CASC4-210ENST00000559550 PSME3P61289 254 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 HIST3H3Q16695 136 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 LINC01554Q52M75 96 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 PATE1Q8WXA2 126 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 OR52E6Q96RD3 313 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 KRTAP2-4Q9BYR9 128 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 KRTAP2-1Q9BYU5 128 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 SLC35A3Q9Y2D2 325 aa0.1□□□□□ -2.39
CASC4-210ENST00000559550 V9GYY5 206 aaPredicted RBP0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms