RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 GAR1Q9NY12 217 aaKnown RBP16.63■□□□□ 0.25
SNX1-206ENST00000559389 PSENENQ9NZ42 101 aa16.63■□□□□ 0.25
SNX1-206ENST00000559389 MRPL36Q9P0J6 103 aaKnown RBP16.63■□□□□ 0.25
SNX1-206ENST00000559389 OR2T8A6NH00 312 aa16.62■□□□□ 0.25
SNX1-206ENST00000559389 TSC22D2O75157 780 aa16.62■□□□□ 0.25
SNX1-206ENST00000559389 IFNA4P05014 189 aa16.62■□□□□ 0.25
SNX1-206ENST00000559389 S100A10P60903 97 aa16.62■□□□□ 0.25
SNX1-206ENST00000559389 RAB11AP62491 216 aa16.62■□□□□ 0.25
SNX1-206ENST00000559389 CD69Q07108 199 aa16.62■□□□□ 0.25
SNX1-206ENST00000559389 ACSM6Q6P461 480 aa16.62■□□□□ 0.25
SNX1-206ENST00000559389 MED28Q9H204 178 aa16.62■□□□□ 0.25
SNX1-206ENST00000559389 STRAPQ9Y3F4 350 aaKnown RBP16.62■□□□□ 0.25
SNX1-206ENST00000559389 WNK1Q9H4A3 2382 aa16.62■□□□□ 0.25
SNX1-206ENST00000559389 SLC25A4P12235 298 aa16.61■□□□□ 0.25
SNX1-206ENST00000559389 CYCSP99999 105 aaKnown RBP16.61■□□□□ 0.25
SNX1-206ENST00000559389 KLF5Q13887 457 aaPredicted RBP16.61■□□□□ 0.25
SNX1-206ENST00000559389 FCN2Q15485 313 aa16.61■□□□□ 0.25
SNX1-206ENST00000559389 MLANAQ16655 118 aa16.61■□□□□ 0.25
SNX1-206ENST00000559389 ETFRF1Q6IPR1 90 aa16.61■□□□□ 0.25
SNX1-206ENST00000559389 SPSB3Q6PJ21 355 aa16.61■□□□□ 0.25
SNX1-206ENST00000559389 SLC16A13Q7RTY0 426 aa16.61■□□□□ 0.25
SNX1-206ENST00000559389 C1QL4Q86Z23 238 aa16.61■□□□□ 0.25
SNX1-206ENST00000559389 OR11H7Q8NGC8 314 aa16.61■□□□□ 0.25
SNX1-206ENST00000559389 ZC4H2Q9NQZ6 224 aa16.61■□□□□ 0.25
SNX1-206ENST00000559389 PAIP2BQ9ULR5 123 aaKnown RBP16.61■□□□□ 0.25
SNX1-206ENST00000559389 PRSS46E5RG02 174 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 OVOL1O14753 267 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 GNG7O60262 68 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 CXCL3P19876 107 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 ADMP35318 185 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 NPBWR1P48145 328 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 PRSS54Q6PEW0 395 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 TMEM14EPQ6UXP3 125 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 OR4X1Q8NH49 305 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 WDR89Q96FK6 387 aaPredicted RBP16.6■□□□□ 0.25
SNX1-206ENST00000559389 RCC1LQ96I51 464 aaKnown RBP16.6■□□□□ 0.25
SNX1-206ENST00000559389 CHRDL1Q9BU40 450 aa16.6■□□□□ 0.25
SNX1-206ENST00000559389 L7N2F9 121 aa16.59■□□□□ 0.25
SNX1-206ENST00000559389 OR2C1O95371 312 aa16.59■□□□□ 0.25
SNX1-206ENST00000559389 SYNJ2BPP57105 145 aa16.59■□□□□ 0.25
SNX1-206ENST00000559389 RRAS2P62070 204 aaPredicted RBP16.59■□□□□ 0.25
SNX1-206ENST00000559389 VAMP2P63027 116 aa16.59■□□□□ 0.25
SNX1-206ENST00000559389 PMS2P5A8MQ11 134 aa16.58■□□□□ 0.24
SNX1-206ENST00000559389 NUPL2O15504 423 aaKnown RBP16.58■□□□□ 0.24
SNX1-206ENST00000559389 CLN5O75503 358 aa16.58■□□□□ 0.24
SNX1-206ENST00000559389 DEDDO75618 318 aa16.58■□□□□ 0.24
SNX1-206ENST00000559389 CTSGP08311 255 aa16.58■□□□□ 0.24
SNX1-206ENST00000559389 PVALBP20472 110 aaPredicted RBP16.58■□□□□ 0.24
SNX1-206ENST00000559389 RND2P52198 227 aa16.58■□□□□ 0.24
SNX1-206ENST00000559389 GPHB5Q86YW7 130 aa16.58■□□□□ 0.24
SNX1-206ENST00000559389 TMEM116Q8NCL8 245 aa16.58■□□□□ 0.24
SNX1-206ENST00000559389 ZNF414Q96IQ9 312 aa16.58■□□□□ 0.24
SNX1-206ENST00000559389 GPX4P36969 197 aaPredicted RBP16.57■□□□□ 0.24
SNX1-206ENST00000559389 LRRC37A5PQ49AS3 106 aa16.57■□□□□ 0.24
SNX1-206ENST00000559389 REC114Q7Z4M0 266 aa16.57■□□□□ 0.24
SNX1-206ENST00000559389 PPP1R1CQ8WVI7 109 aa16.57■□□□□ 0.24
SNX1-206ENST00000559389 CACNG8Q8WXS5 425 aa16.57■□□□□ 0.24
SNX1-206ENST00000559389 MCRIP2Q9BUT9 160 aaKnown RBP16.57■□□□□ 0.24
SNX1-206ENST00000559389 ZNF436Q9C0F3 470 aaPredicted RBP16.57■□□□□ 0.24
SNX1-206ENST00000559389 LGALS9O00182 355 aa16.56■□□□□ 0.24
SNX1-206ENST00000559389 METTL15P1P0C7V9 234 aa16.56■□□□□ 0.24
SNX1-206ENST00000559389 IGLL1P15814 213 aa16.56■□□□□ 0.24
SNX1-206ENST00000559389 OR9G4Q8NGQ1 327 aa16.56■□□□□ 0.24
SNX1-206ENST00000559389 SLC35E1Q96K37 410 aa16.56■□□□□ 0.24
SNX1-206ENST00000559389 IGHV3-35A0A0C4DH35 117 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 A8MWP6 167 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 CCNKO75909 580 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 IGLC1P0CG04 106 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 CAV2P51636 162 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 RELQ04864 619 aaPredicted RBP16.55■□□□□ 0.24
SNX1-206ENST00000559389 OR8G2PQ6IF36 304 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 ACOT7LQ6ZUV0 252 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 TMEM190Q8WZ59 177 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 ACY3Q96HD9 319 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 LYRM2Q9NU23 88 aaPredicted RBP16.55■□□□□ 0.24
SNX1-206ENST00000559389 VWFP04275 2813 aa16.55■□□□□ 0.24
SNX1-206ENST00000559389 SEC14L6B5MCN3 397 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 H0YIZ8 118 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 SCGB2A1O75556 95 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 PET100P0DJ07 73 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 BCAP31P51572 246 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 GAMTQ14353 236 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 FAM106AQ4KMX7 169 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 SAMD5Q5TGI4 173 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 UNQ9165/PRO28630Q6UXU0 137 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 HAPLN4Q86UW8 402 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 NPIPB3Q92617 1050 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 OR5AC2Q9NZP5 309 aa16.54■□□□□ 0.24
SNX1-206ENST00000559389 TRAV30A0A087WSZ9 112 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 NDUFA4O00483 81 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 MPC2O95563 127 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 IGKV1-17P01599 117 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 RLN2P04090 185 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 C9orf66Q5T8R8 295 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 OR1S2Q8NGQ3 325 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 ASB13Q8WXK3 278 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 GPR61Q9BZJ8 451 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 PEMTQ9UBM1 199 aa16.53■□□□□ 0.24
SNX1-206ENST00000559389 IGSF23A1L1A6 192 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 FAM24AA6NFZ4 105 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms