RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 FGL1Q08830 312 aa11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 LRRC37A5PQ49AS3 106 aa11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 EEF1AKMT3Q96AZ1 226 aa11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 C21orf62Q9NYP8 219 aa11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 MBD2Q9UBB5 411 aa11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 WIPF1O43516 503 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 SCAF4O95104 1147 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 TRBV12-3P01733 135 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 IGHV3-11P01762 117 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 CTSGP08311 255 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 ADMP35318 185 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 SULT1A1P50225 295 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 VWC2Q2TAL6 325 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 TCTE3Q8IZS6 198 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 OR2T35Q8NGX2 323 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 MISP3Q96FF7 219 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 RAX2Q96IS3 184 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 GGACTQ9BVM4 153 aa11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 RANGRFQ9HD47 186 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-207ENST00000559309 L7N2F9 121 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 BMPR1BO00238 502 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 HSPB1P04792 205 aaKnown RBP11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 OR8U8P0C7N1 319 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 METTL15P1P0C7V9 234 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 OPRK1P41145 380 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 VAMP2P63027 116 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 DLK1P80370 383 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 GAMTQ14353 236 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 ETFRF1Q6IPR1 90 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 C8orf86Q6ZUL3 223 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 SLC16A13Q7RTY0 426 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 KLHL30-AS1Q8NEE0 82 aa11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 PEF1Q9UBV8 284 aaKnown RBP11.38□□□□□ -0.59
SNRPA1-207ENST00000559309 IGKV1D-37A0A075B6S9 117 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 IGHV4OR15-8A0A075B7B6 117 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 IGKV1OR2-108A0A075B7D4 117 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 A0A087WW49 117 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 IGHV3-21A0A0B4J1V1 117 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 RPS10-NUDT3A0A1W2PQS6 291 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 TGOLN2O43493 480 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 CLN5O75503 358 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 IFNA4P05014 189 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 MFAP4P55083 255 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 EWSR1Q01844 656 aaKnown RBP eCLIP11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 BAXQ07812 192 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 THAP8Q8NA92 274 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 BSCL2Q96G97 398 aaPredicted RBP11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 AQP10Q96PS8 301 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 NEURL2Q9BR09 285 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 CHRDL1Q9BU40 450 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 TNFSF18Q9UNG2 199 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 S4R3C0 116 aa11.37□□□□□ -0.59
SNRPA1-207ENST00000559309 RNF222A6NCQ9 220 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 IGKV1-17P01599 117 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 IGHV3-48P01763 117 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 CLEC3BP05452 202 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 IGLC1P0CG04 106 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 MYCNOSP40205 109 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 CAV2P51636 162 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 NHLH2Q02577 135 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 DEFB136Q30KP8 78 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 SPSB3Q6PJ21 355 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 CLEC19AQ6UXS0 136 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 ACOT7LQ6ZUV0 252 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 OR11H1Q8NG94 326 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 OR11H4Q8NGC9 324 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 THAP6Q8TBB0 222 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 GAR1Q9NY12 217 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 LSM4Q9Y4Z0 139 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 PKD1L1Q8TDX9 2849 aa11.36□□□□□ -0.59
SNRPA1-207ENST00000559309 hCG_2014768A0A024R1R8 64 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 HMSDA8MTL9 139 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 LINC01619G3V211 115 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 CCL24O00175 119 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 IGHV3-23P01764 117 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 RPL12P30050 165 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 S100A11P31949 105 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 GPR183P32249 361 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 NPBWR1P48145 328 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 ZNF616Q08AN1 781 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 NSUN5P1Q3KNT7 163 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 TMEM144Q7Z5S9 345 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 GPHB5Q86YW7 130 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 WFDC9Q8NEX5 89 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 OR10P1Q8NGE3 313 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 OR1N2Q8NGR9 330 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 OR5B12Q96R08 314 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 SLC25A31Q9H0C2 315 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 HSPB11Q9Y547 144 aa11.35□□□□□ -0.59
SNRPA1-207ENST00000559309 A0A1W2PRX2 142 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 OR2T8A6NH00 312 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 PPP5D1E7EU14 171 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 CST7O76096 145 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 RND2P52198 227 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 SLC38A11Q08AI6 406 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 ATP6V1FQ16864 119 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 KHDC1LQ5JSQ8 128 aa11.34□□□□□ -0.59
SNRPA1-207ENST00000559309 OR8G2PQ6IF36 304 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms