RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 FLYWCH2Q96CP2 140 aaKnown RBP13.41□□□□□ -0.26
SPG11-215ENST00000559193 RNF2Q99496 336 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 FAM103A1Q9BTL3 118 aaKnown RBP13.41□□□□□ -0.26
SPG11-215ENST00000559193 SERTAD4Q9NUC0 356 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 CDC42EP3Q9UKI2 254 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 PAM16Q9Y3D7 125 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 CACNA1HO95180 2353 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 K7EM74 188 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 USF1P22415 310 aaPredicted RBP13.41□□□□□ -0.26
SPG11-215ENST00000559193 TMEM183BQ1AE95 376 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 TMEM200BQ69YZ2 307 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 Q8N976 141 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 TMEM167AQ8TBQ9 72 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 ZNF355PQ9NSJ1 428 aa13.41□□□□□ -0.26
SPG11-215ENST00000559193 ZNF124Q15973 351 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 PATE2Q6UY27 113 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 FAM168AQ92567 244 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 KCNS1Q96KK3 526 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 MIEN1Q9BRT3 115 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 TBL2Q9Y4P3 447 aaKnown RBP13.4□□□□□ -0.26
SPG11-215ENST00000559193 OTOGLQ3ZCN5 2332 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 A0A1W2PN81 502 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 COX7A2P2O60397 106 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 IGHV3-48P01763 117 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 HLA-DQA1P01909 254 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 TNFRSF1AP19438 455 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 ADIPOQQ15848 244 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 VAMP8Q9BV40 100 aa13.4□□□□□ -0.26
SPG11-215ENST00000559193 IGKV1D-37A0A075B6S9 117 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 C17orf100A8MU93 164 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 SRIP30626 198 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 NPIPB3Q92617 1050 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 ZNF430Q9H8G1 570 aaPredicted RBP13.39□□□□□ -0.27
SPG11-215ENST00000559193 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
SPG11-215ENST00000559193 A0A1W2PS18 150 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 IZUMO1RA6ND01 250 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 IGLV2-23P01705 113 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 KRTDAPP60985 99 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 ZNF329Q86UD4 541 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 RBMXL3Q8N7X1 1067 aaKnown RBP13.39□□□□□ -0.27
SPG11-215ENST00000559193 PAXXQ9BUH6 204 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 SSBP3Q9BWW4 388 aaPredicted RBP13.39□□□□□ -0.27
SPG11-215ENST00000559193 ZNF586Q9NXT0 402 aa13.39□□□□□ -0.27
SPG11-215ENST00000559193 AMMECR1Q9Y4X0 333 aaPredicted RBP13.39□□□□□ -0.27
SPG11-215ENST00000559193 TCRBV4S1A1TA0A5B7 111 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 LAMA5O15230 3695 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 FSTL3O95633 263 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 C10orf113Q5VZT2 155 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 OR4C13Q8NGP0 309 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 OR4A5Q8NH83 315 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 NRN1Q9NPD7 142 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 ZNF253O75346 499 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 PMCHP20382 165 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 AMTP48728 403 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 TMEM108Q6UXF1 575 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 PDPNQ86YL7 162 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 OR10X1Q8NGY0 326 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 FAM57AQ8TBR7 257 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 MBD6Q96DN6 1003 aa13.38□□□□□ -0.27
SPG11-215ENST00000559193 EP300Q09472 2414 aaPredicted RBP13.38□□□□□ -0.27
SPG11-215ENST00000559193 TRAV34A0A0B4J273 112 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 PEX7O00628 323 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 MRPL52Q86TS9 123 aaKnown RBP13.37□□□□□ -0.27
SPG11-215ENST00000559193 WFDC8Q8IUA0 241 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 OR1L4Q8NGR5 311 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 H1FXQ92522 213 aaKnown RBP13.37□□□□□ -0.27
SPG11-215ENST00000559193 DCHS1Q96JQ0 3298 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 SLAQ13239 276 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 THAP8Q8NA92 274 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 VSTM2AQ8TAG5 236 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 FXYD5Q96DB9 178 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 TPSG1Q9NRR2 321 aa13.37□□□□□ -0.27
SPG11-215ENST00000559193 DPRXA6NFQ7 191 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 DIRC3C9JPN6 131 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 CRYABP02511 175 aaKnown RBP13.36□□□□□ -0.27
SPG11-215ENST00000559193 APCSP02743 223 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 BPIFB3P59826 476 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 LYPD2Q6UXB3 125 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 ST6GALNAC6Q969X2 333 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 PPIAL4EA0A075B759 164 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 PPIAL4DF5H284 164 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 TMEM178BH3BS89 294 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 ZNF324O75467 553 aaPredicted RBP13.36□□□□□ -0.27
SPG11-215ENST00000559193 PPIAL4FP0DN26 164 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 G0S2P27469 103 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 FAM71F2Q6NXP2 309 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 ZNF596Q8TC21 504 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 SAP30LQ9HAJ7 183 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 WASHC3Q9Y3C0 194 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 PPIAL4AQ9Y536 164 aa13.36□□□□□ -0.27
SPG11-215ENST00000559193 SMG1Q96Q15 3661 aaKnown RBP13.36□□□□□ -0.27
SPG11-215ENST00000559193 M0QZK8 103 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 PLAUP00749 431 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 RUSC1-AS1Q66K80 236 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 NIT1Q86X76 327 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 LINC00311Q8N616 119 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 WIPF2Q8TF74 440 aaPredicted RBP13.35□□□□□ -0.27
SPG11-215ENST00000559193 TMEM186Q96B77 213 aa13.35□□□□□ -0.27
SPG11-215ENST00000559193 ZNF331Q9NQX6 463 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms