RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 RND2P52198 227 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 SNRPEP62304 92 aaKnown RBP12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 PRCDQ00LT1 54 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 FBLN7Q53RD9 439 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 ARSJQ5FYB0 599 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 ZNF343Q6P1L6 599 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 GATAD1Q8WUU5 269 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 ENY2Q9NPA8 101 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 NAT8Q9UHE5 227 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 TBL2Q9Y4P3 447 aaKnown RBP12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 A0A1W2PPI3 338 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 UBE2CO00762 179 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 CA2P00918 260 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 CXCL1P09341 107 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 DEFA4P12838 97 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 RPL35P42766 123 aaKnown RBP12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 DEFB112Q30KQ8 113 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 GCSAMLQ5JQS6 135 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 FAM71F2Q6NXP2 309 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 OSR1Q8TAX0 266 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 ZNF48Q96MX3 618 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 MRPL20Q9BYC9 149 aaKnown RBP12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 PXMP4Q9Y6I8 212 aa12.65□□□□□ -0.38
CDC42BPB-204ENST00000559043 S100A6P06703 90 aa12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 MYOD1P15172 320 aa12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 AKR1D1P51857 326 aa12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 C9orf139Q6ZV77 190 aa12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 OR5AN1Q8NGI8 311 aa12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 RPEQ96AT9 228 aa12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 SMIM7Q9BQ49 75 aa12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 KCNIP2Q9NS61 270 aa12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 FKBP11Q9NYL4 201 aa12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPB-204ENST00000559043 IGHV3-72A0A0B4J1Y9 119 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 IGHV1-3A0A0C4DH29 117 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 H0YJW9 148 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 CLDN34H7C241 214 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 PAGE4O60829 102 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 CD24P25063 80 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 ATP5IP56385 69 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 TMEM241Q24JQ0 296 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 OR4F5Q8NH21 305 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 OR4F4Q96R69 305 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 NABP2Q9BQ15 211 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 CTDSP1Q9GZU7 261 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 PLEKHA3Q9HB20 300 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 METTL1Q9UBP6 276 aaKnown RBP12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 TEX50A0A1B0GTY4 177 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 A0A1W2PPV4 95 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 APOA2P02652 100 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 SAA1P0DJI8 122 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 SRP14P37108 136 aaKnown RBP12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 BPIFB3P59826 476 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 TMEM177Q53S58 311 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 MIC13Q5XKP0 118 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 TEPPQ6URK8 271 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 TGIF2LXQ8IUE1 241 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 OR5B3Q8NH48 314 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 PIFOQ8TCI5 191 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 CFHR4Q92496 578 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 MEGF9Q9H1U4 602 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 PARLQ9H300 379 aa12.63□□□□□ -0.39
CDC42BPB-204ENST00000559043 NIPBLQ6KC79 2804 aaeCLIP12.62□□□□□ -0.39
CDC42BPB-204ENST00000559043 TIMM23O14925 209 aa12.62□□□□□ -0.39
CDC42BPB-204ENST00000559043 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
CDC42BPB-204ENST00000559043 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
CDC42BPB-204ENST00000559043 CEACAM3P40198 252 aa12.62□□□□□ -0.39
CDC42BPB-204ENST00000559043 RPS10P46783 165 aaKnown RBP12.62□□□□□ -0.39
CDC42BPB-204ENST00000559043 BSXQ3C1V8 233 aa12.62□□□□□ -0.39
CDC42BPB-204ENST00000559043 URGCP-MRPS24S4R325 110 aa12.62□□□□□ -0.39
CDC42BPB-204ENST00000559043 TGIF2-C20orf24A0A0A6YYL0 155 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 IL3RAP26951 378 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 RPL29P47914 159 aaKnown RBP12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 IQCF2Q8IXL9 164 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 RPUSD4Q96CM3 377 aaKnown RBP12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 RITA1Q96K30 269 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 ZNF98A6NK75 572 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 RPL23P62829 140 aaKnown RBP12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 ZNF674Q2M3X9 581 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 C2orf83Q53S99 150 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 MOB3BQ86TA1 216 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 HINT2Q9BX68 163 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 CDC42EP3Q9UKI2 254 aa12.61□□□□□ -0.39
CDC42BPB-204ENST00000559043 C11orf94C9JXX5 98 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 INS-IGF2F8WCM5 200 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 NPPCP23582 126 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 B2MP61769 119 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 RAB31Q13636 194 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 PDPNQ86YL7 162 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 OR1L8Q8NGR8 309 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 HARBI1Q96MB7 349 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 PRDM13Q9H4Q3 707 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 AP4M1O00189 453 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 PDE6DO43924 150 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 CXorf1O96002 111 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 OPN1MWP04001 364 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 OPN1MW2P0DN77 364 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 OPN1MW3P0DN78 364 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 HNF1AP20823 631 aa12.6□□□□□ -0.39
CDC42BPB-204ENST00000559043 PRR20EP86478 221 aa12.6□□□□□ -0.39
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