RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 OR4D5Q8NGN0 318 aa9.51□□□□□ -0.89
LRRC28-206ENST00000558471 GAR1Q9NY12 217 aaKnown RBP9.51□□□□□ -0.89
LRRC28-206ENST00000558471 MRPL36Q9P0J6 103 aaKnown RBP9.51□□□□□ -0.89
LRRC28-206ENST00000558471 PEMTQ9UBM1 199 aa9.51□□□□□ -0.89
LRRC28-206ENST00000558471 INMT-MINDY4F8WBC2 141 aa9.5□□□□□ -0.89
LRRC28-206ENST00000558471 CCSO14618 274 aa9.5□□□□□ -0.89
LRRC28-206ENST00000558471 SYNGR2O43760 224 aa9.5□□□□□ -0.89
LRRC28-206ENST00000558471 MED6O75586 246 aa9.5□□□□□ -0.89
LRRC28-206ENST00000558471 IAH1Q2TAA2 248 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-206ENST00000558471 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
LRRC28-206ENST00000558471 NOXA1Q86UR1 476 aa9.5□□□□□ -0.89
LRRC28-206ENST00000558471 RNASEH2CQ8TDP1 164 aaKnown RBP9.5□□□□□ -0.89
LRRC28-206ENST00000558471 ZNF414Q96IQ9 312 aa9.5□□□□□ -0.89
LRRC28-206ENST00000558471 MARVELD1Q9BSK0 173 aa9.5□□□□□ -0.89
LRRC28-206ENST00000558471 ZNF436Q9C0F3 470 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-206ENST00000558471 SIGLEC8Q9NYZ4 499 aa9.5□□□□□ -0.89
LRRC28-206ENST00000558471 WI2-2373I1.2A0A1W2PRP0 233 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 C2orf70A6NJV1 201 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 WRBO00258 174 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 NUPL2O15504 423 aaKnown RBP9.49□□□□□ -0.89
LRRC28-206ENST00000558471 GNG7O60262 68 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 TMEM50AO95807 157 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 IGLV1-51P01701 117 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 SPNP16150 400 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 NKX2-1P43699 371 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-206ENST00000558471 NPBWR1P48145 328 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 POLR2GP62487 172 aaKnown RBP eCLIP9.49□□□□□ -0.89
LRRC28-206ENST00000558471 TM4SF20Q53R12 229 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 ZBTB8BQ8NAP8 495 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-206ENST00000558471 OR4X1Q8NH49 305 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 GSKIPQ9P0R6 139 aa9.49□□□□□ -0.89
LRRC28-206ENST00000558471 ZMAT5Q9UDW3 170 aaKnown RBP9.49□□□□□ -0.89
LRRC28-206ENST00000558471 DNAH3Q8TD57 4116 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 RPS10-NUDT3A0A1W2PQS6 291 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 TMEM213A2RRL7 107 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 C15orf62A8K5M9 175 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 A8MWP6 167 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 FAM25EA8MYX2 175 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 NDUFA4O00483 81 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 CLN5O75503 358 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 FOLR2P14207 255 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 CBLN1P23435 193 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 ATP5IP56385 69 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-206ENST00000558471 PRSS54Q6PEW0 395 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 TMEM190Q8WZ59 177 aa9.48□□□□□ -0.89
LRRC28-206ENST00000558471 CIB3Q96Q77 187 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-206ENST00000558471 GPN1Q9HCN4 374 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-206ENST00000558471 ZNF256Q9Y2P7 627 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-206ENST00000558471 IGHV3OR16-8A0A075B7F1 116 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 C5orf51A6NDU8 294 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 SNRPGP15A8MWD9 76 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 K7EIL1 84 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 PRAF2O60831 178 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 IFNA4P05014 189 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 SLC25A4P12235 298 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 ELLP55199 621 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-206ENST00000558471 RELQ04864 619 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-206ENST00000558471 CD69Q07108 199 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 ETFRF1Q6IPR1 90 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 CACNG8Q8WXS5 425 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 PRR25Q96S07 402 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 PALMDQ9NP74 551 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 UFC1Q9Y3C8 167 aa9.47□□□□□ -0.89
LRRC28-206ENST00000558471 SSSCA1O60232 199 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 LY86O95711 162 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 SCGB1D2O95969 90 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 MBPP02686 304 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-206ENST00000558471 C8orf88P0DMB2 117 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 RND2P52198 227 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 PAX9P55771 341 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 RAB11AP62491 216 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 RPP30P78346 268 aaKnown RBP9.46□□□□□ -0.9
LRRC28-206ENST00000558471 DEFB114Q30KQ6 69 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 SPANXN5Q5MJ07 72 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 SLC16A13Q7RTY0 426 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 TMEM116Q8NCL8 245 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 NPIPB3Q92617 1050 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 SMIM8Q96KF7 97 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 C2orf50Q96LR7 162 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 C20orf24Q9BUV8 137 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 PSENENQ9NZ42 101 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 PAIP2BQ9ULR5 123 aaKnown RBP9.46□□□□□ -0.9
LRRC28-206ENST00000558471 SELENOKQ9Y6D0 94 aa9.46□□□□□ -0.9
LRRC28-206ENST00000558471 TRAV30A0A087WSZ9 112 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 IZUMO1RA6ND01 250 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 H3BP45 60 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 K7EMT4 169 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 ZNF207O43670 478 aaKnown RBP9.45□□□□□ -0.9
LRRC28-206ENST00000558471 YIF1AO95070 293 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 IGKV1-17P01599 117 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 GP9P14770 177 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 GPX4P36969 197 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-206ENST00000558471 IL15RAQ13261 267 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 TIGITQ495A1 244 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 CD300EQ496F6 205 aaPredicted RBP9.45□□□□□ -0.9
LRRC28-206ENST00000558471 TOMM20LQ6UXN7 152 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 GSG1LQ6UXU4 331 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 ZNF600Q6ZNG1 722 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 MRAPQ8TCY5 172 aa9.45□□□□□ -0.9
LRRC28-206ENST00000558471 DYNLRB2Q8TF09 96 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms