RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 DOCK11Q5JSL3 2073 aa6.59□□□□□ -1.35
RTF1-205ENST00000558298 CUBNO60494 3623 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 ZNF816-ZNF321PA0A0X1KG74 233 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 FAM90A9PA6NNJ1 464 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 RNF223E7ERA6 249 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 TRAPPC2LH3BP13 241 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 CORTO00230 105 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 PGLYRP1O75594 196 aaPredicted RBP6.58□□□□□ -1.36
RTF1-205ENST00000558298 TMEM50AO95807 157 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 NAPSAO96009 420 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 USF1P22415 310 aaPredicted RBP6.58□□□□□ -1.36
RTF1-205ENST00000558298 LGALS4P56470 323 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 TNFAIP6P98066 277 aaPredicted RBP6.58□□□□□ -1.36
RTF1-205ENST00000558298 TMEM267Q0VDI3 215 aaPredicted RBP6.58□□□□□ -1.36
RTF1-205ENST00000558298 TMEM155Q4W5P6 130 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 FFAR4Q5NUL3 377 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 ODF3L1Q8IXM7 274 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 MKXQ8IYA7 352 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 ZCCHC24Q8N2G6 241 aaKnown RBP6.58□□□□□ -1.36
RTF1-205ENST00000558298 WIPF2Q8TF74 440 aaPredicted RBP6.58□□□□□ -1.36
RTF1-205ENST00000558298 DYRK2Q92630 601 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 C11orf52Q96A22 123 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 OR2V2Q96R30 315 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 OR4C12Q96R67 309 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 RSG1Q9BU20 258 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 ZNF430Q9H8G1 570 aaPredicted RBP6.58□□□□□ -1.36
RTF1-205ENST00000558298 GCM1Q9NP62 436 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 OSTCQ9NRP0 149 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 KCNIP1Q9NZI2 227 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 OR51B2Q9Y5P1 312 aa6.58□□□□□ -1.36
RTF1-205ENST00000558298 PPIAL4EA0A075B759 164 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 TRGV10A0A0A0MS01 117 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 PPIAL4CA0A0B4J2A2 164 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 UBE2L5PA0A1B0GUS4 154 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 C5orf63A6NC05 138 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 A6NDN8 102 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 ANKRD30BLA7E2S9 258 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 KIAA1324LA8MWY0 1029 aaPredicted RBP6.57□□□□□ -1.36
RTF1-205ENST00000558298 SNURFLB1AK76 121 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 PPIAL4DF5H284 164 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 SPRY3O43610 288 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 PAGE4O60829 102 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 LY6HO94772 140 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 HAND1O96004 215 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 AMY1AP04745 511 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 PPIAL4FP0DN26 164 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 FAHP16930 419 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 MDKP21741 143 aaPredicted RBP6.57□□□□□ -1.36
RTF1-205ENST00000558298 GPR6P46095 362 aaPredicted RBP6.57□□□□□ -1.36
RTF1-205ENST00000558298 TFPI2P48307 235 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 COMPP49747 757 aaPredicted RBP6.57□□□□□ -1.36
RTF1-205ENST00000558298 FGF8P55075 233 aaPredicted RBP6.57□□□□□ -1.36
RTF1-205ENST00000558298 CX3CL1P78423 397 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 CCL8P80075 99 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 HIST1H1AQ02539 215 aaPredicted RBP6.57□□□□□ -1.36
RTF1-205ENST00000558298 RAB31Q13636 194 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 LDLRAD2Q5SZI1 272 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 OR4A47Q6IF82 309 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 BRICD5Q6PL45 260 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 ZNF818PQ6ZRF7 136 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 C1QL2Q7Z5L3 287 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 OR2Z1Q8NG97 314 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 OR11L1Q8NGX0 322 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 OR2AE1Q8NHA4 323 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 DPF1Q92782 380 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 TIMD4Q96H15 378 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 LYZL4Q96KX0 146 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 C19orf24Q9BVV8 132 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.57□□□□□ -1.36
RTF1-205ENST00000558298 SOX21Q9Y651 276 aaPredicted RBP6.57□□□□□ -1.36
RTF1-205ENST00000558298 SVEP1Q4LDE5 3571 aa6.57□□□□□ -1.36
RTF1-205ENST00000558298 IGHV4-61A0A0C4DH41 118 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.56□□□□□ -1.36
RTF1-205ENST00000558298 H0YJW9 148 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 TMEM178BH3BS89 294 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 SMAD7O15105 426 aaKnown RBP6.56□□□□□ -1.36
RTF1-205ENST00000558298 CRXO43186 299 aaPredicted RBP6.56□□□□□ -1.36
RTF1-205ENST00000558298 RBFOX2O43251 390 aaKnown RBP eCLIP6.56□□□□□ -1.36
RTF1-205ENST00000558298 OR7C1O76099 320 aaPredicted RBP6.56□□□□□ -1.36
RTF1-205ENST00000558298 COL8A2P25067 703 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 OPRK1P41145 380 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 ATP5IP56385 69 aaPredicted RBP6.56□□□□□ -1.36
RTF1-205ENST00000558298 UBE2G1P62253 170 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 CATR1Q13166 79 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 KLF5Q13887 457 aaPredicted RBP6.56□□□□□ -1.36
RTF1-205ENST00000558298 SLC25A34Q6PIV7 304 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 Q71RC1 249 aaPredicted RBP6.56□□□□□ -1.36
RTF1-205ENST00000558298 ATP5L2Q7Z4Y8 100 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 MAPK1IP1LQ8NDC0 245 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 ZNF596Q8TC21 504 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 ITLN1Q8WWA0 313 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 NPCDR1Q9BY65 106 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 TMEM191AQ9H0A3 160 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 ZNF331Q9NQX6 463 aaPredicted RBP6.56□□□□□ -1.36
RTF1-205ENST00000558298 TMEM167BQ9NRX6 74 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 CACNG5Q9UF02 275 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 NAT8BQ9UHF3 227 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 FBXL7Q9UJT9 491 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 PPP1R3CQ9UQK1 317 aa6.56□□□□□ -1.36
RTF1-205ENST00000558298 WNK2Q9Y3S1 2297 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms