RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 VDAC1P21796 283 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 PYCR1P32322 319 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 RORCP51449 518 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 HCCSP53701 268 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 OR2B8PP59922 312 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 CDC42P60953 191 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 CDK5Q00535 292 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 ENDOGQ14249 297 aaKnown RBP3.81□□□□□ -1.8
RTF1-204ENST00000558117 NEDD8Q15843 81 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 KLHL12Q53G59 568 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 TPTE2P1Q5T6R2 138 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 C12orf73Q69YU5 71 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 FAM19A1Q7Z5A9 133 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 ARRDC1Q8N5I2 433 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 OR4P4Q8NGL7 312 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 SLC35B4Q969S0 331 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 Q96M85 177 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 SCGB3A2Q96PL1 93 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 ZNF426Q9BUY5 554 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 POLR2J2Q9GZM3 115 aaKnown RBP3.81□□□□□ -1.8
RTF1-204ENST00000558117 TOLLIPQ9H0E2 274 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 OR51V1Q9H2C8 321 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 SDHAF2Q9NX18 166 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 SIGLEC7Q9Y286 467 aa3.81□□□□□ -1.8
RTF1-204ENST00000558117 A6NDN8 102 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 A6NIZ1 184 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 RIIAD1A6NNX1 92 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 NCBP2LA6PVI3 153 aaKnown RBP3.8□□□□□ -1.8
RTF1-204ENST00000558117 BHLHE40O14503 412 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 MAGEB4O15481 346 aaPredicted RBP3.8□□□□□ -1.8
RTF1-204ENST00000558117 NDUFB2O95178 105 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 HMGN1P05114 100 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 HTR1AP08908 422 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 HIST1H1CP16403 213 aaKnown RBP3.8□□□□□ -1.8
RTF1-204ENST00000558117 CRHBPP24387 322 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 HTR1DP28221 377 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 GNRHRP30968 328 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 KRTAP10-1P60331 282 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 RAP1BP61224 184 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 PCBD1P61457 104 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 SNRPGP62308 76 aaKnown RBP3.8□□□□□ -1.8
RTF1-204ENST00000558117 HAMPP81172 84 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 RPL18Q07020 188 aaKnown RBP3.8□□□□□ -1.8
RTF1-204ENST00000558117 RBM48Q5RL73 367 aaKnown RBP3.8□□□□□ -1.8
RTF1-204ENST00000558117 UBE2UQ5VVX9 321 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 C5orf46Q6UWT4 87 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 WDR86Q86TI4 376 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 CALHM1Q8IU99 346 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 STX19Q8N4C7 294 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 CCDC71LQ8N9Z2 235 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 OR5L1Q8NGL2 311 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 NMNAT3Q96T66 252 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 HIST1H4GQ99525 98 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 TBX5Q99593 518 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 ADAT1Q9BUB4 502 aaKnown RBP3.8□□□□□ -1.8
RTF1-204ENST00000558117 TTTY10Q9BZA0 68 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 SLC22A4Q9H015 551 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 INIPQ9NRY2 104 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 SCN3BQ9NY72 215 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 TAS2R5Q9NYW4 299 aa3.8□□□□□ -1.8
RTF1-204ENST00000558117 IGHV1OR15-1A0A075B7D0 117 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 A0A087WXM4 84 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 IGKV1D-13A0A0B4J2D9 117 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 A0A0U1RQV1 116 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 K7N7A8 449 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 SULT1C2O00338 296 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 SULT1B1O43704 296 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 GCGP01275 180 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 ASAH2BP0C7U1 165 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 IGKV1-13P0DP09 117 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 RAB5AP20339 215 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 HLA-DMAP28067 261 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 CD34P28906 385 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 ZNF121P58317 390 aaPredicted RBP3.79□□□□□ -1.8
RTF1-204ENST00000558117 ST3GAL4Q11206 333 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 APOFQ13790 326 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 PSG5Q15238 335 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 IDNKQ5T6J7 187 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 ZNF773Q6PK81 442 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 SSX7Q7RTT5 188 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 LINC00596Q86U02 117 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 CEND1Q8N111 149 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 OR5J2Q8NH18 312 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 RNASEH2CQ8TDP1 164 aaKnown RBP3.79□□□□□ -1.8
RTF1-204ENST00000558117 APOBEC3DQ96AK3 386 aaPredicted RBP3.79□□□□□ -1.8
RTF1-204ENST00000558117 KCTD7Q96MP8 289 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 TSNAXQ99598 290 aaKnown RBP3.79□□□□□ -1.8
RTF1-204ENST00000558117 DCUN1D5Q9BTE7 237 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 MRPS26Q9BYN8 205 aaKnown RBP3.79□□□□□ -1.8
RTF1-204ENST00000558117 C11orf68Q9H3H3 251 aaKnown RBP3.79□□□□□ -1.8
RTF1-204ENST00000558117 C12orf10Q9HB07 376 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 DPM3Q9P2X0 92 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 ENOPH1Q9UHY7 261 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 ZNF222Q9UK12 451 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 NOP16Q9Y3C1 178 aaKnown RBP3.79□□□□□ -1.8
RTF1-204ENST00000558117 TPRKBQ9Y3C4 175 aa3.79□□□□□ -1.8
RTF1-204ENST00000558117 IGKV1D-17A0A075B6S4 117 aa3.78□□□□□ -1.8
RTF1-204ENST00000558117 IGHV3OR16-13A0A075B7E8 117 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms